RNA–Protein interactions for RNA: ENST00000536780.6

MIR9-3HG-201, Transcript of MIR9-3 host gene, humanhuman

TSL 3 BASIC

Gene MIR9-3HG, Length 4,778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-201ENST00000536780 TRIM5Q9C035 493 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CEP131Q9UPN4 1083 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 DDX11Q96FC9 970 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CTCFLQ8NI51 663 aaPredicted RBP16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 G2E3Q7L622 706 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 BAG3O95817 575 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
MIR9-3HG-201ENST00000536780 FILIP1LQ4L180 1135 aa16.21■□□□□ 0.19
MIR9-3HG-201ENST00000536780 LMTK2Q8IWU2 1503 aa16.21■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SLC12A7Q9Y666 1083 aa16.21■□□□□ 0.19
MIR9-3HG-201ENST00000536780 C6orf229H3BNL8 230 aa16.21■□□□□ 0.18
MIR9-3HG-201ENST00000536780 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CCDC70Q6NSX1 233 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 NCOA7Q8NI08 942 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
MIR9-3HG-201ENST00000536780 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 IFIT3O14879 490 aaKnown RBP16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PLEKHM2Q8IWE5 1019 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 STIM1Q13586 685 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PLEKHF1Q96S99 279 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PA2G4Q9UQ80 394 aaKnown RBP16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
MIR9-3HG-201ENST00000536780 RAD50Q92878 1312 aa16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 GSTO1P78417 241 aa16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CCAR1Q8IX12 1150 aaKnown RBP16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 SNX21Q969T3 373 aa16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 TRPM1Q7Z4N2 1603 aa16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
MIR9-3HG-201ENST00000536780 USP19O94966 1318 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 FERMT3Q86UX7 667 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 C16orf71Q8IYS4 520 aaPredicted RBP16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CEP57L1Q8IYX8 460 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 BICC1Q9H694 974 aaKnown RBP16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 AOX1Q06278 1338 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PDE4BQ07343 736 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 MAGEC2Q9UBF1 373 aaPredicted RBP16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 SEC63Q9UGP8 760 aaKnown RBP16.17■□□□□ 0.18
MIR9-3HG-201ENST00000536780 MCM5P33992 734 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 EPS15P42566 896 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 KRT18P05783 430 aaKnown RBP16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
MIR9-3HG-201ENST00000536780 GOLGA6L1Q8N7Z2 621 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 SMC2O95347 1197 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ZNF592Q92610 1267 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 PHKG2P15735 406 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 ABCC4O15439 1325 aa16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
MIR9-3HG-201ENST00000536780 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 CCP110O43303 1012 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 STX6O43752 255 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 KIF5BP33176 963 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 KRT23Q9C075 422 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
MIR9-3HG-201ENST00000536780 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms