RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
MRPS35-202ENST00000536569 RPGRQ92834 1020 aaKnown RBP17.18■□□□□ 0.34
MRPS35-202ENST00000536569 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
MRPS35-202ENST00000536569 PSMD1Q99460 953 aa17.18■□□□□ 0.34
MRPS35-202ENST00000536569 UTP14AQ9BVJ6 771 aaKnown RBP17.18■□□□□ 0.34
MRPS35-202ENST00000536569 POTECB2RU33 542 aa17.17■□□□□ 0.34
MRPS35-202ENST00000536569 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
MRPS35-202ENST00000536569 DNAJC5GQ8N7S2 189 aa17.17■□□□□ 0.34
MRPS35-202ENST00000536569 RBM17Q96I25 401 aaKnown RBP17.17■□□□□ 0.34
MRPS35-202ENST00000536569 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
MRPS35-202ENST00000536569 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
MRPS35-202ENST00000536569 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
MRPS35-202ENST00000536569 L3MBTL3Q96JM7 780 aaPredicted RBP17.16■□□□□ 0.34
MRPS35-202ENST00000536569 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
MRPS35-202ENST00000536569 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
MRPS35-202ENST00000536569 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
MRPS35-202ENST00000536569 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
MRPS35-202ENST00000536569 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
MRPS35-202ENST00000536569 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
MRPS35-202ENST00000536569 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.33
MRPS35-202ENST00000536569 ANXA1P04083 346 aa17.14■□□□□ 0.33
MRPS35-202ENST00000536569 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
MRPS35-202ENST00000536569 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
MRPS35-202ENST00000536569 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
MRPS35-202ENST00000536569 ZNF277Q9NRM2 450 aaPredicted RBP17.14■□□□□ 0.33
MRPS35-202ENST00000536569 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
MRPS35-202ENST00000536569 APAF1O14727 1248 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 GNAI1P63096 354 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
MRPS35-202ENST00000536569 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
MRPS35-202ENST00000536569 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 FZD9O00144 591 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
MRPS35-202ENST00000536569 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
MRPS35-202ENST00000536569 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
MRPS35-202ENST00000536569 KLRG1Q96E93 195 aa17.11■□□□□ 0.33
MRPS35-202ENST00000536569 SCN4AP35499 1836 aa17.11■□□□□ 0.33
MRPS35-202ENST00000536569 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
MRPS35-202ENST00000536569 BBOX1O75936 387 aa17.1■□□□□ 0.33
MRPS35-202ENST00000536569 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
MRPS35-202ENST00000536569 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
MRPS35-202ENST00000536569 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
MRPS35-202ENST00000536569 TRIM28Q13263 835 aaKnown RBP17.09■□□□□ 0.33
MRPS35-202ENST00000536569 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
MRPS35-202ENST00000536569 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
MRPS35-202ENST00000536569 GPC2Q8N158 579 aa17.09■□□□□ 0.33
MRPS35-202ENST00000536569 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
MRPS35-202ENST00000536569 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
MRPS35-202ENST00000536569 TMC4Q7Z404 712 aa17.08■□□□□ 0.32
MRPS35-202ENST00000536569 LDHDQ86WU2 507 aa17.08■□□□□ 0.32
MRPS35-202ENST00000536569 ISCA1Q9BUE6 129 aa17.08■□□□□ 0.32
MRPS35-202ENST00000536569 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.32
MRPS35-202ENST00000536569 ABCC4O15439 1325 aa17.07■□□□□ 0.32
MRPS35-202ENST00000536569 EIF6P56537 245 aaKnown RBP17.07■□□□□ 0.32
MRPS35-202ENST00000536569 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
MRPS35-202ENST00000536569 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
MRPS35-202ENST00000536569 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
MRPS35-202ENST00000536569 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
MRPS35-202ENST00000536569 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
MRPS35-202ENST00000536569 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
MRPS35-202ENST00000536569 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
MRPS35-202ENST00000536569 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
MRPS35-202ENST00000536569 HSP90B1P14625 803 aaKnown RBP17.05■□□□□ 0.32
MRPS35-202ENST00000536569 HTRA3P83110 453 aa17.05■□□□□ 0.32
MRPS35-202ENST00000536569 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
MRPS35-202ENST00000536569 GRAPQ13588 217 aa17.05■□□□□ 0.32
MRPS35-202ENST00000536569 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
MRPS35-202ENST00000536569 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
MRPS35-202ENST00000536569 EPHX2P34913 555 aa17.04■□□□□ 0.32
MRPS35-202ENST00000536569 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
MRPS35-202ENST00000536569 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
MRPS35-202ENST00000536569 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
MRPS35-202ENST00000536569 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
MRPS35-202ENST00000536569 NIM1KQ8IY84 436 aa17.03■□□□□ 0.32
MRPS35-202ENST00000536569 LAMB2P55268 1798 aa17.02■□□□□ 0.32
MRPS35-202ENST00000536569 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
MRPS35-202ENST00000536569 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
MRPS35-202ENST00000536569 POTEIP0CG38 1075 aa17.02■□□□□ 0.32
MRPS35-202ENST00000536569 POTEJP0CG39 1038 aa17.02■□□□□ 0.32
MRPS35-202ENST00000536569 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.32
MRPS35-202ENST00000536569 MPNDQ8N594 471 aa17.02■□□□□ 0.32
MRPS35-202ENST00000536569 IL16Q14005 1332 aa17.01■□□□□ 0.31
MRPS35-202ENST00000536569 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
MRPS35-202ENST00000536569 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
MRPS35-202ENST00000536569 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
MRPS35-202ENST00000536569 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
MRPS35-202ENST00000536569 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
MRPS35-202ENST00000536569 ZBTB38Q8NAP3 1195 aaPredicted RBP17.01■□□□□ 0.31
MRPS35-202ENST00000536569 C8orf58Q8NAV2 365 aa17.01■□□□□ 0.31
MRPS35-202ENST00000536569 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms