RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
CDCA3-206ENST00000536241 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
CDCA3-206ENST00000536241 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
CDCA3-206ENST00000536241 UBTFL1P0CB47 393 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-206ENST00000536241 PCDHB15Q9Y5E8 787 aa14.48□□□□□ -0.09
CDCA3-206ENST00000536241 UTYO14607 1347 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 AAMPQ13685 434 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 UBE3BQ7Z3V4 1068 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 SYNE4Q8N205 404 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 FAM89AQ96GI7 184 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 SETDB2Q96T68 719 aa14.47□□□□□ -0.09
CDCA3-206ENST00000536241 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
CDCA3-206ENST00000536241 GNAI2P04899 355 aa14.46□□□□□ -0.09
CDCA3-206ENST00000536241 PCCAP05165 728 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-206ENST00000536241 NFIXQ14938 502 aa14.46□□□□□ -0.09
CDCA3-206ENST00000536241 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
CDCA3-206ENST00000536241 ZBTB38Q8NAP3 1195 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-206ENST00000536241 PDGFDQ9GZP0 370 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-206ENST00000536241 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.09
CDCA3-206ENST00000536241 LRRFIP2Q9Y608 721 aaKnown RBP14.46□□□□□ -0.09
CDCA3-206ENST00000536241 TM4SF1P30408 202 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 CASP7P55210 303 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 NLGN1Q8N2Q7 840 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 UTP14AQ9BVJ6 771 aaKnown RBP14.45□□□□□ -0.1
CDCA3-206ENST00000536241 C4AP0C0L4 1744 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
CDCA3-206ENST00000536241 TUBGCP6Q96RT7 1819 aa14.45□□□□□ -0.1
CDCA3-206ENST00000536241 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 IBTKQ9P2D0 1353 aaPredicted RBP14.44□□□□□ -0.1
CDCA3-206ENST00000536241 BCORQ6W2J9 1755 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 EPHA10Q5JZY3 1008 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 MSL1Q68DK7 614 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 B4GALNT3Q6L9W6 998 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 NUTM1Q86Y26 1132 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 HDAC5Q9UQL6 1122 aa14.44□□□□□ -0.1
CDCA3-206ENST00000536241 N4BP2Q86UW6 1770 aaPredicted RBP14.43□□□□□ -0.1
CDCA3-206ENST00000536241 NTSR2O95665 410 aa14.43□□□□□ -0.1
CDCA3-206ENST00000536241 GTF2E1P29083 439 aaPredicted RBP14.43□□□□□ -0.1
CDCA3-206ENST00000536241 R3HDM1Q15032 1099 aaKnown RBP14.43□□□□□ -0.1
CDCA3-206ENST00000536241 TPTE2Q6XPS3 522 aa14.43□□□□□ -0.1
CDCA3-206ENST00000536241 NBPF5PQ86XG9 351 aaPredicted RBP14.43□□□□□ -0.1
CDCA3-206ENST00000536241 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
CDCA3-206ENST00000536241 ANKRD36CQ5JPF3 1778 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 IRS4O14654 1257 aaPredicted RBP14.42□□□□□ -0.1
CDCA3-206ENST00000536241 IGHDP01880 384 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 SERPINB2P05120 415 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 ERFEQ4G0M1 354 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 CEP85Q6P2H3 762 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 RPAP2Q8IXW5 612 aaPredicted RBP14.42□□□□□ -0.1
CDCA3-206ENST00000536241 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 BICC1Q9H694 974 aaKnown RBP14.42□□□□□ -0.1
CDCA3-206ENST00000536241 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
CDCA3-206ENST00000536241 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
CDCA3-206ENST00000536241 HCLS1P14317 486 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-206ENST00000536241 FOXO4P98177 505 aa14.41□□□□□ -0.1
CDCA3-206ENST00000536241 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
CDCA3-206ENST00000536241 NYXQ9GZU5 481 aa14.41□□□□□ -0.1
CDCA3-206ENST00000536241 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
CDCA3-206ENST00000536241 PNMA6EA0A0J9YXQ4 647 aa14.4□□□□□ -0.1
CDCA3-206ENST00000536241 POLRMTO00411 1230 aaKnown RBP14.4□□□□□ -0.1
CDCA3-206ENST00000536241 NPHP1O15259 732 aa14.4□□□□□ -0.1
CDCA3-206ENST00000536241 DDR1Q08345 913 aa14.4□□□□□ -0.1
CDCA3-206ENST00000536241 SLC16A10Q8TF71 515 aa14.4□□□□□ -0.1
CDCA3-206ENST00000536241 PSDA5PKW4 1024 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-206ENST00000536241 PDE8AO60658 829 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 MMP10P09238 476 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 SLC10A5Q5PT55 438 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 PLA2G12BQ9BX93 195 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 RWDD1Q9H446 243 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-206ENST00000536241 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
CDCA3-206ENST00000536241 PARP3Q9Y6F1 533 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 QSER1Q2KHR3 1735 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 SRGAP3O43295 1099 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 CSF1RP07333 972 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 MTX1Q13505 466 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-206ENST00000536241 PRR5LQ6MZQ0 368 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 CNBD1Q8NA66 436 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-206ENST00000536241 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
CDCA3-206ENST00000536241 ZBTB7AO95365 584 aa14.37□□□□□ -0.11
CDCA3-206ENST00000536241 HDAC1Q13547 482 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-206ENST00000536241 POLA2Q14181 598 aa14.37□□□□□ -0.11
CDCA3-206ENST00000536241 TTLL11Q8NHH1 800 aa14.37□□□□□ -0.11
CDCA3-206ENST00000536241 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-206ENST00000536241 HMMRO75330 724 aa14.36□□□□□ -0.11
CDCA3-206ENST00000536241 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
CDCA3-206ENST00000536241 CTSWP56202 376 aa14.36□□□□□ -0.11
CDCA3-206ENST00000536241 SSH3Q8TE77 659 aa14.36□□□□□ -0.11
CDCA3-206ENST00000536241 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
CDCA3-206ENST00000536241 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
CDCA3-206ENST00000536241 RFX5P48382 616 aaPredicted RBP14.34□□□□□ -0.11
CDCA3-206ENST00000536241 ST5P78524 1137 aa14.34□□□□□ -0.11
CDCA3-206ENST00000536241 KLHDC4Q8TBB5 520 aa14.34□□□□□ -0.11
CDCA3-206ENST00000536241 GREM2Q9H772 168 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms