RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 CEP104O60308 925 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 PRPHP41219 470 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 CCDC92Q53HC0 331 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 HHATQ5VTY9 493 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 CCDC50Q8IVM0 306 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 C17orf53Q8N3J3 647 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 EXOC4Q96A65 974 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 ELF2Q15723 593 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 TRIM74Q86UV6 250 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 TRIM73Q86UV7 250 aa9.39□□□□□ -0.91
CRNKL1-207ENST00000536226 SHPRHQ149N8 1683 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 KCTD17Q8N5Z5 321 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 GBP3Q9H0R5 595 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 SCP2P22307 547 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 TSPAN18Q96SJ8 248 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 NEMFO60524 1076 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 CABS1Q96KC9 395 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 ATP6V1DQ9Y5K8 247 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
CRNKL1-207ENST00000536226 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 ARHGAP29Q52LW3 1261 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 RRP12Q5JTH9 1297 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 C20orf194Q5TEA3 1177 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 MYLK4Q86YV6 388 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 ZMAT2Q96NC0 199 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 VPS18Q9P253 973 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 PAX3P23760 479 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 DCTN1Q14203 1278 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 CRYMQ14894 314 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 ANKRD23Q86SG2 305 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 SMC5Q8IY18 1101 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 NAT10Q9H0A0 1025 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 UBR1Q8IWV7 1749 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
CRNKL1-207ENST00000536226 CHUKO15111 745 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 PRPF4BQ13523 1007 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 DHX8Q14562 1220 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 BECN2A8MW95 431 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 ATP8B1O43520 1251 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 KIF4AO95239 1232 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 SMC1AQ14683 1233 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 MAP9Q49MG5 647 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 PTPRMP28827 1452 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
CRNKL1-207ENST00000536226 RAPGEF3O95398 923 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 LIG3P49916 1009 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 CLUAP1Q96AJ1 413 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 NUB1Q9Y5A7 615 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 TPP2P29144 1249 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 CEP85LQ5SZL2 805 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 GET4Q7L5D6 327 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 SDCCAG8Q86SQ7 713 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 TULP4Q9NRJ4 1543 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 CTIFO43310 598 aaKnown RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 HMMRO75330 724 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 SH3BGRP55822 239 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 CCT2P78371 535 aaKnown RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 ACBD5Q5T8D3 534 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 STAG1Q8WVM7 1258 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 C17orf50Q8WW18 174 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 MIEF2Q96C03 454 aa9.35□□□□□ -0.91
CRNKL1-207ENST00000536226 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 NLRP13Q86W25 1043 aa9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 IQCA1Q86XH1 822 aa9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 G3BP2Q9UN86 482 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 DDX12PQ92771 950 aa9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 SNX21Q969T3 373 aa9.34□□□□□ -0.91
CRNKL1-207ENST00000536226 FRMD3A2A2Y4 597 aa9.34□□□□□ -0.92
CRNKL1-207ENST00000536226 TUBB4AP04350 444 aa9.34□□□□□ -0.92
CRNKL1-207ENST00000536226 CA8P35219 290 aa9.34□□□□□ -0.92
CRNKL1-207ENST00000536226 SPTLC3Q9NUV7 552 aa9.34□□□□□ -0.92
CRNKL1-207ENST00000536226 LRPPRCP42704 1394 aaKnown RBP9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 WHAMMP3Q1A5X7 153 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 TRIM42Q8IWZ5 723 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 ZFYVE9O95405 1425 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 DESP17661 470 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 ARL10Q8N8L6 244 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
CRNKL1-207ENST00000536226 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms