RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NAA30Q147X3 362 aaPredicted RBP16.68■□□□□ 0.26
LIG1-203ENST00000536218 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
LIG1-203ENST00000536218 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
LIG1-203ENST00000536218 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
LIG1-203ENST00000536218 SPTLC3Q9NUV7 552 aa16.68■□□□□ 0.26
LIG1-203ENST00000536218 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
LIG1-203ENST00000536218 STRN4Q9NRL3 753 aa16.68■□□□□ 0.26
LIG1-203ENST00000536218 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
LIG1-203ENST00000536218 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
LIG1-203ENST00000536218 PYCARDQ9ULZ3 195 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 TNS3Q68CZ2 1445 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 TERF2Q15554 542 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 CTNNA3Q9UI47 895 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
LIG1-203ENST00000536218 MEGF6O75095 1541 aa16.66■□□□□ 0.26
LIG1-203ENST00000536218 CAPN2P17655 700 aa16.66■□□□□ 0.26
LIG1-203ENST00000536218 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
LIG1-203ENST00000536218 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
LIG1-203ENST00000536218 CABP4P57796 275 aa16.65■□□□□ 0.26
LIG1-203ENST00000536218 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
LIG1-203ENST00000536218 PA2G4Q9UQ80 394 aaKnown RBP16.65■□□□□ 0.26
LIG1-203ENST00000536218 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
LIG1-203ENST00000536218 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
LIG1-203ENST00000536218 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
LIG1-203ENST00000536218 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIG1-203ENST00000536218 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
LIG1-203ENST00000536218 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 ST18O60284 1047 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 TNNT3P45378 269 aaPredicted RBP16.64■□□□□ 0.25
LIG1-203ENST00000536218 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 PHF14O94880 888 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
LIG1-203ENST00000536218 SECISBP2LQ93073 1101 aaKnown RBP16.64■□□□□ 0.25
LIG1-203ENST00000536218 OSBPL3Q9H4L5 887 aa16.64■□□□□ 0.25
LIG1-203ENST00000536218 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
LIG1-203ENST00000536218 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
LIG1-203ENST00000536218 PDIA6Q15084 440 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
LIG1-203ENST00000536218 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
LIG1-203ENST00000536218 ERC2O15083 957 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 CTIFO43310 598 aaKnown RBP16.63■□□□□ 0.25
LIG1-203ENST00000536218 KIAA1524Q8TCG1 905 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 DCCP43146 1447 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
LIG1-203ENST00000536218 LMO7Q8WWI1 1683 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
LIG1-203ENST00000536218 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
LIG1-203ENST00000536218 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 REC8O95072 547 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 EVA1CP58658 441 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 POLA2Q14181 598 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
LIG1-203ENST00000536218 KRT222Q8N1A0 295 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 MYD88Q99836 296 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 SIL1Q9H173 461 aa16.61■□□□□ 0.25
LIG1-203ENST00000536218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.256e-6■□□□□ 8.9
LIG1-203ENST00000536218 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
LIG1-203ENST00000536218 SLC20A2Q08357 652 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 GRM8O00222 908 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 RAB11FIP3O75154 756 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
LIG1-203ENST00000536218 ZNF592Q92610 1267 aa16.6■□□□□ 0.25
LIG1-203ENST00000536218 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 TEX2Q8IWB9 1127 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
LIG1-203ENST00000536218 KCNF1Q9H3M0 494 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 ST7Q9NRC1 585 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
LIG1-203ENST00000536218 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
LIG1-203ENST00000536218 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.59■□□□□ 0.25
LIG1-203ENST00000536218 V9GYY5 206 aaPredicted RBP16.59■□□□□ 0.25
LIG1-203ENST00000536218 CHMLP26374 656 aa16.58■□□□□ 0.24
LIG1-203ENST00000536218 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.24
LIG1-203ENST00000536218 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
LIG1-203ENST00000536218 MORC2Q9Y6X9 1032 aaPredicted RBP16.58■□□□□ 0.24
LIG1-203ENST00000536218 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms