RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.9□□□□□ -0.82
COL21A1-212ENST00000535941 MAP3K15Q6ZN16 1313 aa9.9□□□□□ -0.82
COL21A1-212ENST00000535941 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
COL21A1-212ENST00000535941 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
COL21A1-212ENST00000535941 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
COL21A1-212ENST00000535941 TTC41PQ6P2S7 1318 aa9.9□□□□□ -0.83
COL21A1-212ENST00000535941 IL6STP40189 918 aaPredicted RBP9.89□□□□□ -0.83
COL21A1-212ENST00000535941 DDB1Q16531 1140 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 ANKRD31Q8N7Z5 1873 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 RTL9Q8NET4 1388 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 SMARCA5O60264 1052 aaPredicted RBP9.89□□□□□ -0.83
COL21A1-212ENST00000535941 SASH1O94885 1247 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 A1BGP04217 495 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 KLHL34Q8N239 644 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
COL21A1-212ENST00000535941 RHPN1Q8TCX5 695 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
COL21A1-212ENST00000535941 CSF1RP07333 972 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 MYL6BP14649 208 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 SDSP20132 328 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 KIF1BPQ96EK5 621 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 DDIT3P35638 169 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
COL21A1-212ENST00000535941 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
COL21A1-212ENST00000535941 TCIRG1Q13488 830 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 ZNF34Q8IZ26 560 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 MYD88Q99836 296 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 DLEC1Q9Y238 1755 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 TAF1P21675 1872 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 CDC45O75419 566 aa9.88□□□□□ -0.83
COL21A1-212ENST00000535941 MX1P20591 662 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 HSP90AB4PQ58FF6 505 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
COL21A1-212ENST00000535941 TICAM2Q86XR7 235 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 CHD4Q14839 1912 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 ABCC12Q96J65 1359 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 SRGAP3O43295 1099 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 ADAMTS2O95450 1211 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 ITPK1Q13572 414 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
COL21A1-212ENST00000535941 PCCAP05165 728 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-212ENST00000535941 GPR108Q9NPR9 543 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 ZBTB22O15209 634 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 CIAO1O76071 339 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
COL21A1-212ENST00000535941 ATG9AQ7Z3C6 839 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 ERC1Q8IUD2 1116 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 SNX21Q969T3 373 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 UBN2Q6ZU65 1347 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 TIAM2Q8IVF5 1701 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 HSPA1LP34931 641 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 AK7Q96M32 723 aa9.86□□□□□ -0.83
COL21A1-212ENST00000535941 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
COL21A1-212ENST00000535941 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
COL21A1-212ENST00000535941 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
COL21A1-212ENST00000535941 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
COL21A1-212ENST00000535941 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
COL21A1-212ENST00000535941 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
COL21A1-212ENST00000535941 MYH15Q9Y2K3 1946 aa9.85□□□□□ -0.83
COL21A1-212ENST00000535941 STARD3NLO95772 234 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 FGD1P98174 961 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 RC3H1Q5TC82 1133 aaKnown RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 KCNB2Q92953 911 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 COL11A2P13942 1736 aaPredicted RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 ZBTB38Q8NAP3 1195 aaPredicted RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 FOCADQ5VW36 1801 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 KIF13BQ9NQT8 1826 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 NLRP10Q86W26 655 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 C9orf78Q9NZ63 289 aaPredicted RBP9.84□□□□□ -0.83
COL21A1-212ENST00000535941 LAMB1P07942 1786 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 CDK5RAP2Q96SN8 1893 aa9.84□□□□□ -0.83
COL21A1-212ENST00000535941 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 SIK1P57059 783 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 HLFQ16534 295 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
COL21A1-212ENST00000535941 C22orf23Q9BZE7 217 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 GSE1Q14687 1217 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 MED23Q9ULK4 1368 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 DDX60LQ5H9U9 1706 aaKnown RBP9.83□□□□□ -0.84
COL21A1-212ENST00000535941 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
COL21A1-212ENST00000535941 CHMLP26374 656 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 VGLL2Q8N8G2 317 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 LINC00116Q8NCU8 138 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL21A1-212ENST00000535941 CCDC87Q9NVE4 849 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 USP21Q9UK80 565 aa9.83□□□□□ -0.84
COL21A1-212ENST00000535941 CRKLP46109 303 aaKnown RBP9.82□□□□□ -0.84
COL21A1-212ENST00000535941 ECM29Q5VYK3 1845 aa9.82□□□□□ -0.84
COL21A1-212ENST00000535941 AFF2P51816 1311 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms