RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 TM4SF1P30408 202 aa20.44■□□□□ 0.86
VAMP1-205ENST00000535927 NLRP10Q86W26 655 aa20.44■□□□□ 0.86
VAMP1-205ENST00000535927 C9orf78Q9NZ63 289 aaPredicted RBP20.44■□□□□ 0.86
VAMP1-205ENST00000535927 SRP68Q9UHB9 627 aaKnown RBP20.44■□□□□ 0.86
VAMP1-205ENST00000535927 ZBTB7BO15156 539 aaPredicted RBP20.43■□□□□ 0.86
VAMP1-205ENST00000535927 PCCAP05165 728 aaPredicted RBP20.43■□□□□ 0.86
VAMP1-205ENST00000535927 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
VAMP1-205ENST00000535927 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
VAMP1-205ENST00000535927 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
VAMP1-205ENST00000535927 H7C1W4 665 aa20.42■□□□□ 0.86
VAMP1-205ENST00000535927 GRM8O00222 908 aa20.42■□□□□ 0.86
VAMP1-205ENST00000535927 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
VAMP1-205ENST00000535927 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
VAMP1-205ENST00000535927 COG6Q9Y2V7 657 aa20.42■□□□□ 0.86
VAMP1-205ENST00000535927 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
VAMP1-205ENST00000535927 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
VAMP1-205ENST00000535927 FKBP8Q14318 412 aa20.41■□□□□ 0.86
VAMP1-205ENST00000535927 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
VAMP1-205ENST00000535927 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
VAMP1-205ENST00000535927 CDHR2Q9BYE9 1310 aa20.41■□□□□ 0.86
VAMP1-205ENST00000535927 NFIXQ14938 502 aa20.4■□□□□ 0.86
VAMP1-205ENST00000535927 CWF19L2Q2TBE0 894 aaKnown RBP20.4■□□□□ 0.86
VAMP1-205ENST00000535927 SH3TC1Q8TE82 1336 aa20.39■□□□□ 0.85
VAMP1-205ENST00000535927 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
VAMP1-205ENST00000535927 MTFR1LQ9H019 292 aa20.39■□□□□ 0.85
VAMP1-205ENST00000535927 ZBTB40Q9NUA8 1239 aa20.39■□□□□ 0.85
VAMP1-205ENST00000535927 TRMT112Q9UI30 125 aaKnown RBP20.39■□□□□ 0.85
VAMP1-205ENST00000535927 TNNQ9UQP3 1299 aa20.39■□□□□ 0.85
VAMP1-205ENST00000535927 GPTP24298 496 aa20.38■□□□□ 0.85
VAMP1-205ENST00000535927 SLC10A5Q5PT55 438 aa20.38■□□□□ 0.85
VAMP1-205ENST00000535927 SMIM5Q71RC9 77 aa20.38■□□□□ 0.85
VAMP1-205ENST00000535927 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
VAMP1-205ENST00000535927 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
VAMP1-205ENST00000535927 UBN2Q6ZU65 1347 aa20.37■□□□□ 0.85
VAMP1-205ENST00000535927 COL24A1Q17RW2 1714 aa20.37■□□□□ 0.85
VAMP1-205ENST00000535927 GNAI2P04899 355 aa20.37■□□□□ 0.85
VAMP1-205ENST00000535927 SUSD4Q5VX71 490 aa20.37■□□□□ 0.85
VAMP1-205ENST00000535927 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
VAMP1-205ENST00000535927 NTSR2O95665 410 aa20.36■□□□□ 0.85
VAMP1-205ENST00000535927 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
VAMP1-205ENST00000535927 CRBNQ96SW2 442 aa20.36■□□□□ 0.85
VAMP1-205ENST00000535927 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
VAMP1-205ENST00000535927 POLRMTO00411 1230 aaKnown RBP20.35■□□□□ 0.85
VAMP1-205ENST00000535927 SERPINB2P05120 415 aa20.35■□□□□ 0.85
VAMP1-205ENST00000535927 CASP7P55210 303 aa20.35■□□□□ 0.85
VAMP1-205ENST00000535927 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
VAMP1-205ENST00000535927 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
VAMP1-205ENST00000535927 RIC1Q4ADV7 1423 aa20.35■□□□□ 0.85
VAMP1-205ENST00000535927 BICDL1Q6ZP65 573 aa20.34■□□□□ 0.85
VAMP1-205ENST00000535927 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
VAMP1-205ENST00000535927 MEIS3Q99687 375 aa20.34■□□□□ 0.85
VAMP1-205ENST00000535927 PDE8AO60658 829 aa20.33■□□□□ 0.85
VAMP1-205ENST00000535927 MMP10P09238 476 aa20.33■□□□□ 0.85
VAMP1-205ENST00000535927 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.85
VAMP1-205ENST00000535927 POLD1P28340 1107 aa20.33■□□□□ 0.85
VAMP1-205ENST00000535927 ST5P78524 1137 aa20.33■□□□□ 0.85
VAMP1-205ENST00000535927 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
VAMP1-205ENST00000535927 IRS4O14654 1257 aaPredicted RBP20.32■□□□□ 0.84
VAMP1-205ENST00000535927 NPHP1O15259 732 aa20.32■□□□□ 0.84
VAMP1-205ENST00000535927 NRXN2Q9P2S2 1712 aa20.32■□□□□ 0.84
VAMP1-205ENST00000535927 ZBTB7AO95365 584 aa20.31■□□□□ 0.84
VAMP1-205ENST00000535927 MTX1Q13505 466 aa20.31■□□□□ 0.84
VAMP1-205ENST00000535927 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
VAMP1-205ENST00000535927 FAM89AQ96GI7 184 aa20.31■□□□□ 0.84
VAMP1-205ENST00000535927 DDR1Q08345 913 aa20.3■□□□□ 0.84
VAMP1-205ENST00000535927 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
VAMP1-205ENST00000535927 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
VAMP1-205ENST00000535927 BRIP1Q9BX63 1249 aa20.3■□□□□ 0.84
VAMP1-205ENST00000535927 HMMRO75330 724 aa20.29■□□□□ 0.84
VAMP1-205ENST00000535927 CSF1RP07333 972 aa20.29■□□□□ 0.84
VAMP1-205ENST00000535927 PRR5LQ6MZQ0 368 aa20.29■□□□□ 0.84
VAMP1-205ENST00000535927 MYH3P11055 1940 aa20.29■□□□□ 0.84
VAMP1-205ENST00000535927 CHD4Q14839 1912 aa20.29■□□□□ 0.84
VAMP1-205ENST00000535927 KLRG2A4D1S0 409 aaPredicted RBP20.28■□□□□ 0.84
VAMP1-205ENST00000535927 PDE6BP35913 854 aa20.28■□□□□ 0.84
VAMP1-205ENST00000535927 ATP8B2P98198 1209 aa20.28■□□□□ 0.84
VAMP1-205ENST00000535927 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
VAMP1-205ENST00000535927 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
VAMP1-205ENST00000535927 LAMB2P55268 1798 aa20.27■□□□□ 0.84
VAMP1-205ENST00000535927 RTL9Q8NET4 1388 aa20.27■□□□□ 0.84
VAMP1-205ENST00000535927 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
VAMP1-205ENST00000535927 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.84
VAMP1-205ENST00000535927 SUCLG2Q96I99 432 aa20.27■□□□□ 0.84
VAMP1-205ENST00000535927 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
VAMP1-205ENST00000535927 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.84
VAMP1-205ENST00000535927 FOXO4P98177 505 aa20.26■□□□□ 0.83
VAMP1-205ENST00000535927 ANKRD44Q8N8A2 993 aa20.26■□□□□ 0.83
VAMP1-205ENST00000535927 ZNF784Q8NCA9 323 aaPredicted RBP20.26■□□□□ 0.83
VAMP1-205ENST00000535927 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 PTGER2P43116 358 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 CTSWP56202 376 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 NUTM1Q86Y26 1132 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 TTLL11Q8NHH1 800 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
VAMP1-205ENST00000535927 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
VAMP1-205ENST00000535927 SGIP1Q9BQI5 828 aa20.24■□□□□ 0.83
VAMP1-205ENST00000535927 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
VAMP1-205ENST00000535927 BICC1Q9H694 974 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms