RNA–Protein interactions for RNA: ENST00000535604.5

PAAF1-205, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5 BASIC

Gene PAAF1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-205ENST00000535604 PRELPP51888 382 aa21.5■■□□□ 1.03
PAAF1-205ENST00000535604 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
PAAF1-205ENST00000535604 SPINK5Q9NQ38 1064 aaPredicted RBP21.5■■□□□ 1.03
PAAF1-205ENST00000535604 LMNB1P20700 586 aa21.49■■□□□ 1.03
PAAF1-205ENST00000535604 NLRP3Q96P20 1036 aa21.49■■□□□ 1.03
PAAF1-205ENST00000535604 TRMT112Q9UI30 125 aaKnown RBP21.49■■□□□ 1.03
PAAF1-205ENST00000535604 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 FANCIQ9NVI1 1328 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 DLEC1Q9Y238 1755 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 ATP5J2-PTCD1G3V325 749 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 HOXA10P31260 410 aaPredicted RBP21.48■■□□□ 1.03
PAAF1-205ENST00000535604 TRIM28Q13263 835 aaKnown RBP21.48■■□□□ 1.03
PAAF1-205ENST00000535604 SOGA3Q5TF21 947 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 RIC3Q7Z5B4 369 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
PAAF1-205ENST00000535604 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
PAAF1-205ENST00000535604 C3orf67Q6ZVT6 689 aa21.47■■□□□ 1.03
PAAF1-205ENST00000535604 RIC1Q4ADV7 1423 aa21.47■■□□□ 1.03
PAAF1-205ENST00000535604 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
PAAF1-205ENST00000535604 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
PAAF1-205ENST00000535604 TCERG1O14776 1098 aaKnown RBP21.46■■□□□ 1.03
PAAF1-205ENST00000535604 RPGRQ92834 1020 aaKnown RBP21.46■■□□□ 1.03
PAAF1-205ENST00000535604 STK31Q9BXU1 1019 aa21.46■■□□□ 1.03
PAAF1-205ENST00000535604 VAMP4O75379 141 aa21.45■■□□□ 1.02
PAAF1-205ENST00000535604 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
PAAF1-205ENST00000535604 ZNF428Q96B54 188 aa21.45■■□□□ 1.02
PAAF1-205ENST00000535604 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
PAAF1-205ENST00000535604 DDX58O95786 925 aaKnown RBP21.44■■□□□ 1.02
PAAF1-205ENST00000535604 SLC4A2P04920 1241 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 HCLS1P14317 486 aaPredicted RBP21.44■■□□□ 1.02
PAAF1-205ENST00000535604 RBM17Q96I25 401 aaKnown RBP21.44■■□□□ 1.02
PAAF1-205ENST00000535604 CRAMP1Q96RY5 1269 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 ZNF521Q96K83 1311 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 SLX4Q8IY92 1834 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 TAOK3Q9H2K8 898 aa21.44■■□□□ 1.02
PAAF1-205ENST00000535604 LTBP3Q9NS15 1303 aa21.43■■□□□ 1.02
PAAF1-205ENST00000535604 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
PAAF1-205ENST00000535604 FAM89AQ96GI7 184 aa21.43■■□□□ 1.02
PAAF1-205ENST00000535604 MYH16Q9H6N6 1097 aa21.43■■□□□ 1.02
PAAF1-205ENST00000535604 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
PAAF1-205ENST00000535604 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
PAAF1-205ENST00000535604 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
PAAF1-205ENST00000535604 MYD88Q99836 296 aa21.41■■□□□ 1.02
PAAF1-205ENST00000535604 METTL22Q9BUU2 404 aaPredicted RBP21.41■■□□□ 1.02
PAAF1-205ENST00000535604 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 G2E3Q7L622 706 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 KIF3CO14782 793 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 CCDC191Q8NCU4 936 aa21.4■■□□□ 1.02
PAAF1-205ENST00000535604 CEP350Q5VT06 3117 aa21.39■■□□□ 1.02
PAAF1-205ENST00000535604 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
PAAF1-205ENST00000535604 TNRC6CQ9HCJ0 1690 aaKnown RBP21.39■■□□□ 1.01
PAAF1-205ENST00000535604 RTL5Q5HYW3 569 aaPredicted RBP21.38■■□□□ 1.01
PAAF1-205ENST00000535604 ZBTB38Q8NAP3 1195 aaPredicted RBP21.38■■□□□ 1.01
PAAF1-205ENST00000535604 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
PAAF1-205ENST00000535604 KDM2BQ8NHM5 1336 aa21.38■■□□□ 1.01
PAAF1-205ENST00000535604 SBF1O95248 1867 aa21.38■■□□□ 1.01
PAAF1-205ENST00000535604 GLTPD2A6NH11 291 aa21.37■■□□□ 1.01
PAAF1-205ENST00000535604 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
PAAF1-205ENST00000535604 IRS4O14654 1257 aaPredicted RBP21.37■■□□□ 1.01
PAAF1-205ENST00000535604 BBOX1O75936 387 aa21.37■■□□□ 1.01
PAAF1-205ENST00000535604 FLIIQ13045 1269 aa21.37■■□□□ 1.01
PAAF1-205ENST00000535604 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
PAAF1-205ENST00000535604 PPEF1O14829 653 aaPredicted RBP21.36■■□□□ 1.01
PAAF1-205ENST00000535604 GRIPAP1Q4V328 841 aa21.36■■□□□ 1.01
PAAF1-205ENST00000535604 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
PAAF1-205ENST00000535604 CWC25Q9NXE8 425 aaPredicted RBP21.36■■□□□ 1.01
PAAF1-205ENST00000535604 ABCC4O15439 1325 aa21.35■■□□□ 1.01
PAAF1-205ENST00000535604 IGKV5-2P06315 115 aa21.35■■□□□ 1.01
PAAF1-205ENST00000535604 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
PAAF1-205ENST00000535604 PSMD1Q99460 953 aa21.35■■□□□ 1.01
PAAF1-205ENST00000535604 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
PAAF1-205ENST00000535604 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
PAAF1-205ENST00000535604 PCCAP05165 728 aaPredicted RBP21.34■■□□□ 1.01
PAAF1-205ENST00000535604 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
PAAF1-205ENST00000535604 FER1L6Q2WGJ9 1857 aa21.34■■□□□ 1.01
PAAF1-205ENST00000535604 ANKRD36CQ5JPF3 1778 aa21.34■■□□□ 1.01
PAAF1-205ENST00000535604 NEXNQ0ZGT2 675 aa21.34■■□□□ 1.01
PAAF1-205ENST00000535604 SNED1Q8TER0 1413 aa21.33■■□□□ 1.01
PAAF1-205ENST00000535604 E9PSI1 815 aa21.33■■□□□ 1
PAAF1-205ENST00000535604 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1
PAAF1-205ENST00000535604 FKBP5Q13451 457 aaPredicted RBP21.33■■□□□ 1
PAAF1-205ENST00000535604 GRAPQ13588 217 aa21.33■■□□□ 1
PAAF1-205ENST00000535604 SLC51AQ86UW1 340 aa21.33■■□□□ 1
PAAF1-205ENST00000535604 GRAPLQ8TC17 118 aaPredicted RBP21.33■■□□□ 1
PAAF1-205ENST00000535604 TMX4Q9H1E5 349 aaPredicted RBP21.33■■□□□ 1
PAAF1-205ENST00000535604 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
PAAF1-205ENST00000535604 SP8Q8IXZ3 490 aa21.32■■□□□ 1
PAAF1-205ENST00000535604 MIER1Q8N108 512 aa21.32■■□□□ 1
PAAF1-205ENST00000535604 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
PAAF1-205ENST00000535604 TOMM70O94826 608 aa21.31■■□□□ 1
PAAF1-205ENST00000535604 SLFN5Q08AF3 891 aa21.31■■□□□ 1
PAAF1-205ENST00000535604 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
PAAF1-205ENST00000535604 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
PAAF1-205ENST00000535604 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
PAAF1-205ENST00000535604 DNAAF4Q8WXU2 420 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms