RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CHPF2Q9P2E5 772 aa15.37■□□□□ 0.05
KNTC1-208ENST00000535410 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 ANXA1P04083 346 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
KNTC1-208ENST00000535410 HSPA6P17066 643 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
KNTC1-208ENST00000535410 SLC10A5Q5PT55 438 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 RBM46Q8TBY0 533 aaKnown RBP15.36■□□□□ 0.05
KNTC1-208ENST00000535410 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 CRAMP1Q96RY5 1269 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
KNTC1-208ENST00000535410 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
KNTC1-208ENST00000535410 NTSR2O95665 410 aa15.35■□□□□ 0.05
KNTC1-208ENST00000535410 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
KNTC1-208ENST00000535410 KRT24Q2M2I5 525 aa15.35■□□□□ 0.05
KNTC1-208ENST00000535410 RRAGCQ9HB90 399 aa15.35■□□□□ 0.05
KNTC1-208ENST00000535410 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
KNTC1-208ENST00000535410 HSP90B1P14625 803 aaKnown RBP15.34■□□□□ 0.05
KNTC1-208ENST00000535410 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
KNTC1-208ENST00000535410 FSTL1Q12841 308 aa15.34■□□□□ 0.05
KNTC1-208ENST00000535410 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
KNTC1-208ENST00000535410 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
KNTC1-208ENST00000535410 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
KNTC1-208ENST00000535410 NLRP10Q86W26 655 aa15.33■□□□□ 0.04
KNTC1-208ENST00000535410 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
KNTC1-208ENST00000535410 RIC3Q7Z5B4 369 aa15.32■□□□□ 0.04
KNTC1-208ENST00000535410 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
KNTC1-208ENST00000535410 IL16Q14005 1332 aa15.32■□□□□ 0.04
KNTC1-208ENST00000535410 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
KNTC1-208ENST00000535410 BBOX1O75936 387 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 APLP1P51693 650 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 PRELPP51888 382 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 TRIM28Q13263 835 aaKnown RBP15.31■□□□□ 0.04
KNTC1-208ENST00000535410 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 PSMD1Q99460 953 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 NUP98P52948 1817 aa15.31■□□□□ 0.04
KNTC1-208ENST00000535410 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
KNTC1-208ENST00000535410 TMC4Q7Z404 712 aa15.3■□□□□ 0.04
KNTC1-208ENST00000535410 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
KNTC1-208ENST00000535410 SBF1O95248 1867 aa15.29■□□□□ 0.04
KNTC1-208ENST00000535410 IQCA1LA6NCM1 817 aa15.29■□□□□ 0.04
KNTC1-208ENST00000535410 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
KNTC1-208ENST00000535410 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
KNTC1-208ENST00000535410 VPS33BQ9H267 617 aa15.29■□□□□ 0.04
KNTC1-208ENST00000535410 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
KNTC1-208ENST00000535410 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
KNTC1-208ENST00000535410 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
KNTC1-208ENST00000535410 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
KNTC1-208ENST00000535410 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
KNTC1-208ENST00000535410 ISCA1Q9BUE6 129 aa15.28■□□□□ 0.04
KNTC1-208ENST00000535410 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
KNTC1-208ENST00000535410 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.04
KNTC1-208ENST00000535410 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
KNTC1-208ENST00000535410 ATP5J2-PTCD1G3V325 749 aa15.26■□□□□ 0.03
KNTC1-208ENST00000535410 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
KNTC1-208ENST00000535410 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
KNTC1-208ENST00000535410 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
KNTC1-208ENST00000535410 FER1L6Q2WGJ9 1857 aa15.26■□□□□ 0.03
KNTC1-208ENST00000535410 DDNO94850 711 aaPredicted RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 NEXNQ0ZGT2 675 aa15.25■□□□□ 0.03
KNTC1-208ENST00000535410 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 GRAPQ13588 217 aa15.25■□□□□ 0.03
KNTC1-208ENST00000535410 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
KNTC1-208ENST00000535410 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 GRAPLQ8TC17 118 aaPredicted RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
KNTC1-208ENST00000535410 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
KNTC1-208ENST00000535410 FZD9O00144 591 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
KNTC1-208ENST00000535410 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
KNTC1-208ENST00000535410 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 FAM89AQ96GI7 184 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
KNTC1-208ENST00000535410 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
KNTC1-208ENST00000535410 TNRC6CQ9HCJ0 1690 aaKnown RBP15.24■□□□□ 0.03
KNTC1-208ENST00000535410 ABCC4O15439 1325 aa15.23■□□□□ 0.03
KNTC1-208ENST00000535410 IRS4O14654 1257 aaPredicted RBP15.23■□□□□ 0.03
KNTC1-208ENST00000535410 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
KNTC1-208ENST00000535410 KSR2Q6VAB6 950 aa15.23■□□□□ 0.03
KNTC1-208ENST00000535410 GPC2Q8N158 579 aa15.23■□□□□ 0.03
KNTC1-208ENST00000535410 MPNDQ8N594 471 aa15.23■□□□□ 0.03
KNTC1-208ENST00000535410 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
KNTC1-208ENST00000535410 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
KNTC1-208ENST00000535410 CWC25Q9NXE8 425 aaPredicted RBP15.23■□□□□ 0.03
KNTC1-208ENST00000535410 POTECB2RU33 542 aa15.22■□□□□ 0.03
KNTC1-208ENST00000535410 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
KNTC1-208ENST00000535410 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
KNTC1-208ENST00000535410 NIM1KQ8IY84 436 aa15.22■□□□□ 0.03
KNTC1-208ENST00000535410 MYD88Q99836 296 aa15.22■□□□□ 0.03
KNTC1-208ENST00000535410 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
KNTC1-208ENST00000535410 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
KNTC1-208ENST00000535410 PCCAP05165 728 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms