RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 FAM177BA6PVY3 158 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 ALDH1B1P30837 517 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 DSG3P32926 999 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-206ENST00000535290 MTHFSDQ2M296 383 aaKnown RBP11.34□□□□□ -0.59
CLIP1-206ENST00000535290 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
CLIP1-206ENST00000535290 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-206ENST00000535290 GPRC5DQ9NZD1 345 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 PGAP2Q9UHJ9 254 aa11.34□□□□□ -0.59
CLIP1-206ENST00000535290 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-206ENST00000535290 TRPA1O75762 1119 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 HIRAP54198 1017 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-206ENST00000535290 HUNKP57058 714 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 CTU1Q7Z7A3 348 aaKnown RBP11.33□□□□□ -0.6
CLIP1-206ENST00000535290 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 GCC1Q96CN9 775 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 RNF186Q9NXI6 227 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 SAGE1Q9NXZ1 904 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 TRPM7Q96QT4 1865 aa11.33□□□□□ -0.6
CLIP1-206ENST00000535290 HMOX1P09601 288 aa11.32□□□□□ -0.6
CLIP1-206ENST00000535290 KIF23Q02241 960 aaPredicted RBP11.32□□□□□ -0.6
CLIP1-206ENST00000535290 CLEC4GQ6UXB4 293 aa11.32□□□□□ -0.6
CLIP1-206ENST00000535290 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLIP1-206ENST00000535290 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-206ENST00000535290 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
CLIP1-206ENST00000535290 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
CLIP1-206ENST00000535290 NIM1KQ8IY84 436 aa11.31□□□□□ -0.6
CLIP1-206ENST00000535290 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
CLIP1-206ENST00000535290 KCNQ3O43525 872 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 CXCL9Q07325 125 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
CLIP1-206ENST00000535290 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
CLIP1-206ENST00000535290 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
CLIP1-206ENST00000535290 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
CLIP1-206ENST00000535290 ZC3H15Q8WU90 426 aaKnown RBP11.29□□□□□ -0.6
CLIP1-206ENST00000535290 FMNL2Q96PY5 1086 aa11.29□□□□□ -0.6
CLIP1-206ENST00000535290 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
CLIP1-206ENST00000535290 BCORQ6W2J9 1755 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-206ENST00000535290 TEFQ10587 303 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 AOC3Q16853 763 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
CLIP1-206ENST00000535290 HOXA10P31260 410 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-206ENST00000535290 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLIP1-206ENST00000535290 HLFQ16534 295 aa11.27□□□□□ -0.61
CLIP1-206ENST00000535290 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
CLIP1-206ENST00000535290 PANK3Q9H999 370 aa11.27□□□□□ -0.61
CLIP1-206ENST00000535290 ZNRF3Q9ULT6 936 aa11.27□□□□□ -0.61
CLIP1-206ENST00000535290 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
CLIP1-206ENST00000535290 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-206ENST00000535290 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
CLIP1-206ENST00000535290 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
CLIP1-206ENST00000535290 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
CLIP1-206ENST00000535290 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-206ENST00000535290 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-206ENST00000535290 RAD17O75943 681 aa11.25□□□□□ -0.61
CLIP1-206ENST00000535290 PKN2Q16513 984 aaKnown RBP11.25□□□□□ -0.61
CLIP1-206ENST00000535290 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-206ENST00000535290 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
CLIP1-206ENST00000535290 CNOT7Q9UIV1 285 aaKnown RBP11.25□□□□□ -0.61
CLIP1-206ENST00000535290 RGL2O15211 777 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 SLC10A3P09131 477 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 KRT26Q7Z3Y9 468 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 C2orf69Q8N8R5 385 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
CLIP1-206ENST00000535290 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 ZNF296Q8WUU4 475 aaPredicted RBP11.23□□□□□ -0.61
CLIP1-206ENST00000535290 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
CLIP1-206ENST00000535290 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 KIF7Q2M1P5 1343 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
CLIP1-206ENST00000535290 H7C1D1 291 aa11.22□□□□□ -0.61
CLIP1-206ENST00000535290 TBC1D8O95759 1140 aa11.22□□□□□ -0.61
CLIP1-206ENST00000535290 EGFRP00533 1210 aa11.22□□□□□ -0.61
CLIP1-206ENST00000535290 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
CLIP1-206ENST00000535290 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
CLIP1-206ENST00000535290 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
CLIP1-206ENST00000535290 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.61
CLIP1-206ENST00000535290 YDJCA8MPS7 323 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms