RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
TNFRSF1A-205ENST00000534885 C4BP0C0L5 1744 aa25.21■■□□□ 1.63
TNFRSF1A-205ENST00000534885 RABL6Q3YEC7 729 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF1A-205ENST00000534885 LRRCC1Q9C099 1032 aa25.21■■□□□ 1.63
TNFRSF1A-205ENST00000534885 PA2G4Q9UQ80 394 aaKnown RBP25.21■■□□□ 1.63
TNFRSF1A-205ENST00000534885 UBN2Q6ZU65 1347 aa25.2■■□□□ 1.62
TNFRSF1A-205ENST00000534885 GNPATO15228 680 aa25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 FOXO4P98177 505 aa25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 ZNF34Q8IZ26 560 aa25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 OTUD7AQ8TE49 926 aaPredicted RBP25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 FAM89AQ96GI7 184 aa25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 BACH2Q9BYV9 841 aa25.19■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RPS6KA4O75676 772 aa25.18■■□□□ 1.62
TNFRSF1A-205ENST00000534885 PCCAP05165 728 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF1A-205ENST00000534885 AMIGO3Q86WK7 504 aa25.18■■□□□ 1.62
TNFRSF1A-205ENST00000534885 NOP58Q9Y2X3 529 aaKnown RBP25.18■■□□□ 1.62
TNFRSF1A-205ENST00000534885 C8orf34Q49A92 452 aa25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 ZBTB38Q8NAP3 1195 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 FAM161AQ3B820 660 aa25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 LMBR1LQ6UX01 489 aa25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 PLEKHM2Q8IWE5 1019 aa25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 SYNE4Q8N205 404 aa25.17■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
TNFRSF1A-205ENST00000534885 KLHDC4Q8TBB5 520 aa25.16■■□□□ 1.62
TNFRSF1A-205ENST00000534885 IL1RAPL2Q9NP60 686 aa25.15■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RTCBQ9Y3I0 505 aaKnown RBP25.15■■□□□ 1.62
TNFRSF1A-205ENST00000534885 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RHPN1Q8TCX5 695 aa25.14■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RBM19Q9Y4C8 960 aaKnown RBP25.14■■□□□ 1.62
TNFRSF1A-205ENST00000534885 RFX5P48382 616 aaPredicted RBP25.14■■□□□ 1.61
TNFRSF1A-205ENST00000534885 HSP90AB4PQ58FF6 505 aa25.14■■□□□ 1.61
TNFRSF1A-205ENST00000534885 TRMT112Q9UI30 125 aaKnown RBP25.14■■□□□ 1.61
TNFRSF1A-205ENST00000534885 OS9Q13438 667 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
TNFRSF1A-205ENST00000534885 KIF1BPQ96EK5 621 aa25.13■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SIL1Q9H173 461 aa25.13■■□□□ 1.61
TNFRSF1A-205ENST00000534885 CHMP3Q9Y3E7 222 aa25.13■■□□□ 1.61
TNFRSF1A-205ENST00000534885 PROM2Q8N271 834 aa25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 AK7Q96M32 723 aa25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 NIP7Q9Y221 180 aaKnown RBP eCLIP25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 ZNF652Q9Y2D9 606 aa25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 CDHR2Q9BYE9 1310 aa25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
TNFRSF1A-205ENST00000534885 PTPN12Q05209 780 aaKnown RBP25.11■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SUSD4Q5VX71 490 aa25.11■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SRP68Q9UHB9 627 aaKnown RBP25.11■■□□□ 1.61
TNFRSF1A-205ENST00000534885 CLEC4GQ6UXB4 293 aa25.11■■□□□ 1.61
TNFRSF1A-205ENST00000534885 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
TNFRSF1A-205ENST00000534885 FAM177BA6PVY3 158 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 PHF14O94880 888 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 TXNRD1Q16881 649 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 ARHGEF1Q92888 912 aaKnown RBP25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 BCL2L12Q9HB09 334 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 COPRSQ9NQ92 184 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 NARFQ9UHQ1 456 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 UBR3Q6ZT12 1888 aa25.1■■□□□ 1.61
TNFRSF1A-205ENST00000534885 APBA3O96018 575 aa25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 USPL1Q5W0Q7 1092 aa25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 MYH3P11055 1940 aa25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SALL3Q9BXA9 1300 aa25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 G3BP1Q13283 466 aaKnown RBP eCLIP25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 PARP10Q53GL7 1025 aa25.09■■□□□ 1.61
TNFRSF1A-205ENST00000534885 TNS1Q9HBL0 1735 aaKnown RBP25.08■■□□□ 1.61
TNFRSF1A-205ENST00000534885 IRS4O14654 1257 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF1A-205ENST00000534885 BMP2KLQ5H9B9 411 aa25.08■■□□□ 1.61
TNFRSF1A-205ENST00000534885 SASH1O94885 1247 aa25.08■■□□□ 1.6
TNFRSF1A-205ENST00000534885 ERC1Q8IUD2 1116 aa25.08■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.08■■□□□ 1.6
TNFRSF1A-205ENST00000534885 GSPT1P15170 499 aaKnown RBP25.07■■□□□ 1.6
TNFRSF1A-205ENST00000534885 PDE1AP54750 535 aa25.07■■□□□ 1.6
TNFRSF1A-205ENST00000534885 UTP14AQ9BVJ6 771 aaKnown RBP25.07■■□□□ 1.6
TNFRSF1A-205ENST00000534885 PLSCR1O15162 318 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 ZPR1O75312 459 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 CCDC85AQ96PX6 553 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 NTSR2O95665 410 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TTC22Q5TAA0 569 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TSHZ3Q63HK5 1081 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 NUTM1Q86Y26 1132 aa25.06■■□□□ 1.6
TNFRSF1A-205ENST00000534885 SH3TC1Q8TE82 1336 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 RGL2O15211 777 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 CSF1RP07333 972 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 MX1P20591 662 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TRAPPC3LQ5T215 181 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TBC1D9BQ66K14 1250 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 BICDL1Q6ZP65 573 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 OSBPL3Q9H4L5 887 aa25.05■■□□□ 1.6
TNFRSF1A-205ENST00000534885 USP42Q9H9J4 1324 aaKnown RBP25.04■■□□□ 1.6
TNFRSF1A-205ENST00000534885 RFC4P35249 363 aa25.04■■□□□ 1.6
TNFRSF1A-205ENST00000534885 CTSWP56202 376 aa25.04■■□□□ 1.6
TNFRSF1A-205ENST00000534885 DDX60Q8IY21 1712 aaKnown RBP25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 TTLL11Q8NHH1 800 aa25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 ZNF594Q96JF6 807 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 PDE8AO60658 829 aa25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 HCLS1P14317 486 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 CLASRPQ8N2M8 674 aaKnown RBP25.03■■□□□ 1.6
TNFRSF1A-205ENST00000534885 CCDC57Q2TAC2 916 aa25.02■■□□□ 1.6
TNFRSF1A-205ENST00000534885 STAP2Q9UGK3 403 aa25.01■■□□□ 1.59
TNFRSF1A-205ENST00000534885 ADRA2BP18089 450 aa25.01■■□□□ 1.59
TNFRSF1A-205ENST00000534885 GREM2Q9H772 168 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms