RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
CAPN1-228ENST00000534373 UTP14AQ9BVJ6 771 aaKnown RBP17.43■□□□□ 0.38
CAPN1-228ENST00000534373 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
CAPN1-228ENST00000534373 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-228ENST00000534373 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
CAPN1-228ENST00000534373 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 ANXA1P04083 346 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 GNAI1P63096 354 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
CAPN1-228ENST00000534373 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
CAPN1-228ENST00000534373 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
CAPN1-228ENST00000534373 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
CAPN1-228ENST00000534373 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
CAPN1-228ENST00000534373 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
CAPN1-228ENST00000534373 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
CAPN1-228ENST00000534373 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
CAPN1-228ENST00000534373 PSMD1Q99460 953 aa17.4■□□□□ 0.38
CAPN1-228ENST00000534373 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
CAPN1-228ENST00000534373 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
CAPN1-228ENST00000534373 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
CAPN1-228ENST00000534373 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-228ENST00000534373 POTECB2RU33 542 aa17.39■□□□□ 0.37
CAPN1-228ENST00000534373 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
CAPN1-228ENST00000534373 NLRP10Q86W26 655 aa17.39■□□□□ 0.37
CAPN1-228ENST00000534373 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
CAPN1-228ENST00000534373 WDR90Q96KV7 1748 aa17.38■□□□□ 0.37
CAPN1-228ENST00000534373 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
CAPN1-228ENST00000534373 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
CAPN1-228ENST00000534373 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPN1-228ENST00000534373 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
CAPN1-228ENST00000534373 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-228ENST00000534373 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-228ENST00000534373 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
CAPN1-228ENST00000534373 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-228ENST00000534373 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
CAPN1-228ENST00000534373 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-228ENST00000534373 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
CAPN1-228ENST00000534373 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
CAPN1-228ENST00000534373 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
CAPN1-228ENST00000534373 ANP32CO43423 234 aa17.35■□□□□ 0.37
CAPN1-228ENST00000534373 BBOX1O75936 387 aa17.35■□□□□ 0.37
CAPN1-228ENST00000534373 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
CAPN1-228ENST00000534373 DNAJC5GQ8N7S2 189 aa17.35■□□□□ 0.37
CAPN1-228ENST00000534373 VPS33BQ9H267 617 aa17.35■□□□□ 0.37
CAPN1-228ENST00000534373 FZD9O00144 591 aa17.34■□□□□ 0.37
CAPN1-228ENST00000534373 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-228ENST00000534373 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
CAPN1-228ENST00000534373 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
CAPN1-228ENST00000534373 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
CAPN1-228ENST00000534373 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
CAPN1-228ENST00000534373 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
CAPN1-228ENST00000534373 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.36
CAPN1-228ENST00000534373 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
CAPN1-228ENST00000534373 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
CAPN1-228ENST00000534373 ABCC4O15439 1325 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-228ENST00000534373 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-228ENST00000534373 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 DDX46Q7L014 1031 aaKnown RBP17.31■□□□□ 0.36
CAPN1-228ENST00000534373 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 GPC2Q8N158 579 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
CAPN1-228ENST00000534373 IL16Q14005 1332 aa17.3■□□□□ 0.36
CAPN1-228ENST00000534373 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
CAPN1-228ENST00000534373 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
CAPN1-228ENST00000534373 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
CAPN1-228ENST00000534373 SUPT20HQ8NEM7 779 aa17.3■□□□□ 0.36
CAPN1-228ENST00000534373 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-228ENST00000534373 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
CAPN1-228ENST00000534373 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CAPN1-228ENST00000534373 GRAPQ13588 217 aa17.29■□□□□ 0.36
CAPN1-228ENST00000534373 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
CAPN1-228ENST00000534373 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
CAPN1-228ENST00000534373 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-228ENST00000534373 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-228ENST00000534373 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
CAPN1-228ENST00000534373 SCN4AP35499 1836 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
CAPN1-228ENST00000534373 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
CAPN1-228ENST00000534373 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
CAPN1-228ENST00000534373 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-228ENST00000534373 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-228ENST00000534373 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
CAPN1-228ENST00000534373 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-228ENST00000534373 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
CAPN1-228ENST00000534373 MPNDQ8N594 471 aa17.26■□□□□ 0.35
CAPN1-228ENST00000534373 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-228ENST00000534373 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
CAPN1-228ENST00000534373 EPHX2P34913 555 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms