RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 ARHGEF25Q86VW2 580 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 TPCN1Q9ULQ1 816 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 MTMR6Q9Y217 621 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.67■□□□□ 0.9
SIPA1-209ENST00000534313 ZNF500O60304 480 aaPredicted RBP20.67■□□□□ 0.9
SIPA1-209ENST00000534313 ZKSCAN1P17029 563 aaPredicted RBP20.67■□□□□ 0.9
SIPA1-209ENST00000534313 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
SIPA1-209ENST00000534313 C17orf53Q8N3J3 647 aaPredicted RBP20.66■□□□□ 0.9
SIPA1-209ENST00000534313 USP42Q9H9J4 1324 aaKnown RBP20.66■□□□□ 0.9
SIPA1-209ENST00000534313 NFAT5O94916 1531 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 IGKV5-2P06315 115 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
SIPA1-209ENST00000534313 UBE2HP62256 183 aa20.65■□□□□ 0.9
SIPA1-209ENST00000534313 VPS53Q5VIR6 699 aa20.65■□□□□ 0.9
SIPA1-209ENST00000534313 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
SIPA1-209ENST00000534313 MYD88Q99836 296 aa20.65■□□□□ 0.9
SIPA1-209ENST00000534313 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
SIPA1-209ENST00000534313 ZNF589Q86UQ0 364 aaPredicted RBP20.64■□□□□ 0.89
SIPA1-209ENST00000534313 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 CHMP4AQ9BY43 222 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 ADCY5O95622 1261 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 PDIA6Q15084 440 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
SIPA1-209ENST00000534313 DDX17Q92841 729 aaKnown RBP20.64■□□□□ 0.89
SIPA1-209ENST00000534313 A0A0U1RQG5 324 aaPredicted RBP20.63■□□□□ 0.89
SIPA1-209ENST00000534313 SLC27A2O14975 620 aa20.63■□□□□ 0.89
SIPA1-209ENST00000534313 LARP1BQ659C4 914 aaKnown RBP20.63■□□□□ 0.89
SIPA1-209ENST00000534313 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
SIPA1-209ENST00000534313 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
SIPA1-209ENST00000534313 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
SIPA1-209ENST00000534313 CDC37L1Q7L3B6 337 aa20.63■□□□□ 0.89
SIPA1-209ENST00000534313 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
SIPA1-209ENST00000534313 DDX21Q9NR30 783 aaKnown RBP eCLIP20.62■□□□□ 0.89
SIPA1-209ENST00000534313 MED1Q15648 1581 aaPredicted RBP20.62■□□□□ 0.89
SIPA1-209ENST00000534313 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
SIPA1-209ENST00000534313 CAMK4Q16566 473 aa20.62■□□□□ 0.89
SIPA1-209ENST00000534313 ATP6V1DQ9Y5K8 247 aa20.61■□□□□ 0.89
SIPA1-209ENST00000534313 TFIP11Q9UBB9 837 aaKnown RBP20.61■□□□□ 0.89
SIPA1-209ENST00000534313 ATP5J2-PTCD1G3V325 749 aa20.61■□□□□ 0.89
SIPA1-209ENST00000534313 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
SIPA1-209ENST00000534313 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
SIPA1-209ENST00000534313 ZHX1Q9UKY1 873 aaPredicted RBP20.61■□□□□ 0.89
SIPA1-209ENST00000534313 N4BP2Q86UW6 1770 aaPredicted RBP20.6■□□□□ 0.89
SIPA1-209ENST00000534313 KIAA2012Q0VF49 1180 aa20.6■□□□□ 0.89
SIPA1-209ENST00000534313 ZNF790Q6PG37 636 aa20.6■□□□□ 0.89
SIPA1-209ENST00000534313 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
SIPA1-209ENST00000534313 CCDC129Q6ZRS4 1044 aa20.6■□□□□ 0.89
SIPA1-209ENST00000534313 BLOC1S2Q6QNY1 142 aa20.6■□□□□ 0.89
SIPA1-209ENST00000534313 KRT28Q7Z3Y7 464 aa20.59■□□□□ 0.89
SIPA1-209ENST00000534313 ZSCAN31Q96LW9 406 aaPredicted RBP20.59■□□□□ 0.89
SIPA1-209ENST00000534313 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
SIPA1-209ENST00000534313 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
SIPA1-209ENST00000534313 NEXNQ0ZGT2 675 aa20.59■□□□□ 0.89
SIPA1-209ENST00000534313 CSPP1Q1MSJ5 1256 aa20.59■□□□□ 0.89
SIPA1-209ENST00000534313 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
SIPA1-209ENST00000534313 NEURL1BA8MQ27 555 aa20.58■□□□□ 0.89
SIPA1-209ENST00000534313 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.89
SIPA1-209ENST00000534313 SEC62Q99442 399 aaKnown RBP20.58■□□□□ 0.89
SIPA1-209ENST00000534313 TTC6Q86TZ1 520 aa20.58■□□□□ 0.89
SIPA1-209ENST00000534313 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
SIPA1-209ENST00000534313 PPFIA3O75145 1194 aa20.58■□□□□ 0.88
SIPA1-209ENST00000534313 FOSBP53539 338 aa20.58■□□□□ 0.88
SIPA1-209ENST00000534313 SPC24Q8NBT2 197 aa20.58■□□□□ 0.88
SIPA1-209ENST00000534313 LRRC2Q9BYS8 371 aa20.58■□□□□ 0.88
SIPA1-209ENST00000534313 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.88
SIPA1-209ENST00000534313 AP5Z1O43299 807 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 SLFNL1Q499Z3 407 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 UBE3BQ7Z3V4 1068 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 CABLES1Q8TDN4 633 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.57■□□□□ 0.88
SIPA1-209ENST00000534313 GCKRQ14397 625 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 TFCP2Q12800 502 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 LARP1Q6PKG0 1096 aaKnown RBP20.57■□□□□ 0.88
SIPA1-209ENST00000534313 MAP7D2Q96T17 732 aa20.57■□□□□ 0.88
SIPA1-209ENST00000534313 FAM177BA6PVY3 158 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 CSB-PGBD3P0DP91 1061 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 FAM184AQ8NB25 1140 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 TSC1Q92574 1164 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 HDAC5Q9UQL6 1122 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 LIG1P18858 919 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 CKAP2LQ8IYA6 745 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 HEG1Q9ULI3 1381 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
SIPA1-209ENST00000534313 BCL11BQ9C0K0 894 aaPredicted RBP20.56■□□□□ 0.88
SIPA1-209ENST00000534313 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
SIPA1-209ENST00000534313 JAK2O60674 1132 aa20.55■□□□□ 0.88
SIPA1-209ENST00000534313 MCM5P33992 734 aa20.55■□□□□ 0.88
SIPA1-209ENST00000534313 PSMA5P28066 241 aa20.55■□□□□ 0.88
SIPA1-209ENST00000534313 TOB2Q14106 344 aaPredicted RBP20.55■□□□□ 0.88
SIPA1-209ENST00000534313 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
SIPA1-209ENST00000534313 KCNB2Q92953 911 aa20.55■□□□□ 0.88
SIPA1-209ENST00000534313 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
SIPA1-209ENST00000534313 DDX46Q7L014 1031 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms