RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 ZNF521Q96K83 1311 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 NFKBIEO00221 500 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 RASSF7Q02833 373 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 GOLGA2Q08379 1002 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 C7orf43Q8WVR3 580 aa24.44■■□□□ 1.5
PACS1-215ENST00000534273 TCERG1O14776 1098 aaKnown RBP24.43■■□□□ 1.5
PACS1-215ENST00000534273 C3orf67Q6ZVT6 689 aa24.43■■□□□ 1.5
PACS1-215ENST00000534273 RIC3Q7Z5B4 369 aa24.43■■□□□ 1.5
PACS1-215ENST00000534273 ATP5J2-PTCD1G3V325 749 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 ALDH1B1P30837 517 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 HOXA10P31260 410 aaPredicted RBP24.42■■□□□ 1.5
PACS1-215ENST00000534273 PRELPP51888 382 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 EXOSC9Q06265 439 aaKnown RBP24.42■■□□□ 1.5
PACS1-215ENST00000534273 TRIM28Q13263 835 aaKnown RBP24.42■■□□□ 1.5
PACS1-215ENST00000534273 STK31Q9BXU1 1019 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 RNF181Q9P0P0 153 aa24.42■■□□□ 1.5
PACS1-215ENST00000534273 TRMT112Q9UI30 125 aaKnown RBP24.42■■□□□ 1.5
PACS1-215ENST00000534273 TNRC6CQ9HCJ0 1690 aaKnown RBP24.42■■□□□ 1.5
PACS1-215ENST00000534273 SLX4Q8IY92 1834 aa24.41■■□□□ 1.5
PACS1-215ENST00000534273 VAMP4O75379 141 aa24.41■■□□□ 1.5
PACS1-215ENST00000534273 SOGA3Q5TF21 947 aa24.41■■□□□ 1.5
PACS1-215ENST00000534273 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
PACS1-215ENST00000534273 LMNB1P20700 586 aa24.4■■□□□ 1.5
PACS1-215ENST00000534273 ZNF526Q8TF50 670 aaPredicted RBP24.4■■□□□ 1.5
PACS1-215ENST00000534273 RPGRQ92834 1020 aaKnown RBP24.4■■□□□ 1.5
PACS1-215ENST00000534273 NLRP3Q96P20 1036 aa24.4■■□□□ 1.5
PACS1-215ENST00000534273 SH3TC1Q8TE82 1336 aa24.39■■□□□ 1.5
PACS1-215ENST00000534273 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
PACS1-215ENST00000534273 HCLS1P14317 486 aaPredicted RBP24.39■■□□□ 1.49
PACS1-215ENST00000534273 ZNF428Q96B54 188 aa24.39■■□□□ 1.49
PACS1-215ENST00000534273 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.49
PACS1-215ENST00000534273 ANKRD36CQ5JPF3 1778 aa24.39■■□□□ 1.49
PACS1-215ENST00000534273 SLC4A2P04920 1241 aa24.38■■□□□ 1.49
PACS1-215ENST00000534273 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
PACS1-215ENST00000534273 CRAMP1Q96RY5 1269 aa24.38■■□□□ 1.49
PACS1-215ENST00000534273 G2E3Q7L622 706 aa24.37■■□□□ 1.49
PACS1-215ENST00000534273 RBM17Q96I25 401 aaKnown RBP24.37■■□□□ 1.49
PACS1-215ENST00000534273 LTBP3Q9NS15 1303 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 CCDC93Q567U6 631 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 OLFM4Q6UX06 510 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 MYD88Q99836 296 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 METTL22Q9BUU2 404 aaPredicted RBP24.36■■□□□ 1.49
PACS1-215ENST00000534273 TAOK3Q9H2K8 898 aa24.36■■□□□ 1.49
PACS1-215ENST00000534273 ARFGEF2Q9Y6D5 1785 aa24.35■■□□□ 1.49
PACS1-215ENST00000534273 FAM89AQ96GI7 184 aa24.35■■□□□ 1.49
PACS1-215ENST00000534273 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
PACS1-215ENST00000534273 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
PACS1-215ENST00000534273 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
PACS1-215ENST00000534273 SBF1O95248 1867 aa24.33■■□□□ 1.49
PACS1-215ENST00000534273 RTKN2Q8IZC4 609 aa24.33■■□□□ 1.49
PACS1-215ENST00000534273 MIER1Q8N108 512 aa24.33■■□□□ 1.49
PACS1-215ENST00000534273 CCDC191Q8NCU4 936 aa24.33■■□□□ 1.49
PACS1-215ENST00000534273 ZC3H4Q9UPT8 1303 aaKnown RBP24.33■■□□□ 1.48
PACS1-215ENST00000534273 FLIIQ13045 1269 aa24.31■■□□□ 1.48
PACS1-215ENST00000534273 FER1L6Q2WGJ9 1857 aa24.31■■□□□ 1.48
PACS1-215ENST00000534273 CC2D2BQ6DHV5 1058 aa24.31■■□□□ 1.48
PACS1-215ENST00000534273 ZBTB38Q8NAP3 1195 aaPredicted RBP24.31■■□□□ 1.48
PACS1-215ENST00000534273 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
PACS1-215ENST00000534273 E9PSI1 815 aa24.3■■□□□ 1.48
PACS1-215ENST00000534273 FKBP4Q02790 459 aaKnown RBP eCLIP24.3■■□□□ 1.48
PACS1-215ENST00000534273 RTL5Q5HYW3 569 aaPredicted RBP24.3■■□□□ 1.48
PACS1-215ENST00000534273 ABCC4O15439 1325 aa24.3■■□□□ 1.48
PACS1-215ENST00000534273 IRS4O14654 1257 aaPredicted RBP24.29■■□□□ 1.48
PACS1-215ENST00000534273 PPEF1O14829 653 aaPredicted RBP24.29■■□□□ 1.48
PACS1-215ENST00000534273 IGKV5-2P06315 115 aa24.29■■□□□ 1.48
PACS1-215ENST00000534273 CACNA1SQ13698 1873 aa24.29■■□□□ 1.48
PACS1-215ENST00000534273 SNED1Q8TER0 1413 aa24.28■■□□□ 1.48
PACS1-215ENST00000534273 PCCAP05165 728 aaPredicted RBP24.28■■□□□ 1.48
PACS1-215ENST00000534273 SLFN5Q08AF3 891 aa24.28■■□□□ 1.48
PACS1-215ENST00000534273 SF3B3Q15393 1217 aaKnown RBP24.28■■□□□ 1.48
PACS1-215ENST00000534273 DDX46Q7L014 1031 aaKnown RBP24.28■■□□□ 1.48
PACS1-215ENST00000534273 KIF3CO14782 793 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 BBOX1O75936 387 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 C1QTNF8P60827 252 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 NEXNQ0ZGT2 675 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
PACS1-215ENST00000534273 SLC51AQ86UW1 340 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 NMRK2Q9NPI5 230 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
PACS1-215ENST00000534273 KDM2BQ8NHM5 1336 aa24.27■■□□□ 1.48
PACS1-215ENST00000534273 GRIPAP1Q4V328 841 aa24.26■■□□□ 1.47
PACS1-215ENST00000534273 PSMD1Q99460 953 aa24.26■■□□□ 1.47
PACS1-215ENST00000534273 ATP6V0A2Q9Y487 856 aa24.26■■□□□ 1.47
PACS1-215ENST00000534273 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
PACS1-215ENST00000534273 GRAPQ13588 217 aa24.25■■□□□ 1.47
PACS1-215ENST00000534273 GRAPLQ8TC17 118 aaPredicted RBP24.25■■□□□ 1.47
PACS1-215ENST00000534273 JARID2Q92833 1246 aaPredicted RBP24.25■■□□□ 1.47
PACS1-215ENST00000534273 CDCA7LQ96GN5 454 aa24.25■■□□□ 1.47
PACS1-215ENST00000534273 GLTPD2A6NH11 291 aa24.24■■□□□ 1.47
PACS1-215ENST00000534273 NEURL1BA8MQ27 555 aa24.24■■□□□ 1.47
PACS1-215ENST00000534273 CWF19L2Q2TBE0 894 aaKnown RBP24.24■■□□□ 1.47
PACS1-215ENST00000534273 DNAAF4Q8WXU2 420 aa24.24■■□□□ 1.47
PACS1-215ENST00000534273 SP8Q8IXZ3 490 aa24.23■■□□□ 1.47
PACS1-215ENST00000534273 LAMB2P55268 1798 aa24.22■■□□□ 1.47
PACS1-215ENST00000534273 DDX60Q8IY21 1712 aaKnown RBP24.22■■□□□ 1.47
PACS1-215ENST00000534273 TRMT2AQ8IZ69 625 aaKnown RBP24.22■■□□□ 1.47
PACS1-215ENST00000534273 TMX4Q9H1E5 349 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms