RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
LRRK1-210ENST00000534045 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
LRRK1-210ENST00000534045 GLTPD2A6NH11 291 aa24.56■■□□□ 1.52
LRRK1-210ENST00000534045 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
LRRK1-210ENST00000534045 RTKN2Q8IZC4 609 aa24.56■■□□□ 1.52
LRRK1-210ENST00000534045 IBTKQ9P2D0 1353 aaPredicted RBP24.55■■□□□ 1.52
LRRK1-210ENST00000534045 TIAM2Q8IVF5 1701 aa24.55■■□□□ 1.52
LRRK1-210ENST00000534045 NTSR2O95665 410 aa24.55■■□□□ 1.52
LRRK1-210ENST00000534045 PRELPP51888 382 aa24.55■■□□□ 1.52
LRRK1-210ENST00000534045 LTBP3Q9NS15 1303 aa24.55■■□□□ 1.52
LRRK1-210ENST00000534045 PLBD2Q8NHP8 589 aa24.54■■□□□ 1.52
LRRK1-210ENST00000534045 C7orf43Q8WVR3 580 aa24.54■■□□□ 1.52
LRRK1-210ENST00000534045 TRMT112Q9UI30 125 aaKnown RBP24.54■■□□□ 1.52
LRRK1-210ENST00000534045 CRY2Q49AN0 593 aa24.53■■□□□ 1.52
LRRK1-210ENST00000534045 FER1L6Q2WGJ9 1857 aa24.53■■□□□ 1.52
LRRK1-210ENST00000534045 ABCC12Q96J65 1359 aa24.53■■□□□ 1.52
LRRK1-210ENST00000534045 SLX4Q8IY92 1834 aa24.52■■□□□ 1.52
LRRK1-210ENST00000534045 VEGFAP15692 232 aaPredicted RBP24.52■■□□□ 1.52
LRRK1-210ENST00000534045 HSPA6P17066 643 aa24.52■■□□□ 1.52
LRRK1-210ENST00000534045 FKBP4Q02790 459 aaKnown RBP eCLIP24.52■■□□□ 1.52
LRRK1-210ENST00000534045 CC2D2BQ6DHV5 1058 aa24.52■■□□□ 1.52
LRRK1-210ENST00000534045 NLRP10Q86W26 655 aa24.52■■□□□ 1.52
LRRK1-210ENST00000534045 RIC3Q7Z5B4 369 aa24.51■■□□□ 1.51
LRRK1-210ENST00000534045 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
LRRK1-210ENST00000534045 DICER1Q9UPY3 1922 aaKnown RBP24.51■■□□□ 1.51
LRRK1-210ENST00000534045 TNRC6CQ9HCJ0 1690 aaKnown RBP24.5■■□□□ 1.51
LRRK1-210ENST00000534045 HOXA10P31260 410 aaPredicted RBP24.5■■□□□ 1.51
LRRK1-210ENST00000534045 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
LRRK1-210ENST00000534045 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
LRRK1-210ENST00000534045 SLC10A5Q5PT55 438 aa24.5■■□□□ 1.51
LRRK1-210ENST00000534045 CCDC30Q5VVM6 783 aa24.5■■□□□ 1.51
LRRK1-210ENST00000534045 RBM46Q8TBY0 533 aaKnown RBP24.5■■□□□ 1.51
LRRK1-210ENST00000534045 CRAMP1Q96RY5 1269 aa24.5■■□□□ 1.51
LRRK1-210ENST00000534045 TCERG1O14776 1098 aaKnown RBP24.49■■□□□ 1.51
LRRK1-210ENST00000534045 WWC1Q8IX03 1113 aa24.49■■□□□ 1.51
LRRK1-210ENST00000534045 C8orf58Q8NAV2 365 aa24.49■■□□□ 1.51
LRRK1-210ENST00000534045 SALL2Q9Y467 1007 aaPredicted RBP24.49■■□□□ 1.51
LRRK1-210ENST00000534045 GRIPAP1Q4V328 841 aa24.48■■□□□ 1.51
LRRK1-210ENST00000534045 OLFM4Q6UX06 510 aa24.48■■□□□ 1.51
LRRK1-210ENST00000534045 SYNE4Q8N205 404 aa24.48■■□□□ 1.51
LRRK1-210ENST00000534045 SH3TC1Q8TE82 1336 aa24.48■■□□□ 1.51
LRRK1-210ENST00000534045 ZNF277Q9NRM2 450 aaPredicted RBP24.48■■□□□ 1.51
LRRK1-210ENST00000534045 ATP5J2-PTCD1G3V325 749 aa24.47■■□□□ 1.51
LRRK1-210ENST00000534045 HCLS1P14317 486 aaPredicted RBP24.47■■□□□ 1.51
LRRK1-210ENST00000534045 RIC1Q4ADV7 1423 aa24.46■■□□□ 1.51
LRRK1-210ENST00000534045 PPEF1O14829 653 aaPredicted RBP24.46■■□□□ 1.51
LRRK1-210ENST00000534045 FAM9BQ8IZU0 186 aa24.46■■□□□ 1.51
LRRK1-210ENST00000534045 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
LRRK1-210ENST00000534045 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.5
LRRK1-210ENST00000534045 FSTL1Q12841 308 aa24.45■■□□□ 1.5
LRRK1-210ENST00000534045 DDX46Q7L014 1031 aaKnown RBP24.45■■□□□ 1.5
LRRK1-210ENST00000534045 JDP2Q8WYK2 163 aa24.45■■□□□ 1.5
LRRK1-210ENST00000534045 TSR2Q969E8 191 aaKnown RBP24.45■■□□□ 1.5
LRRK1-210ENST00000534045 STK31Q9BXU1 1019 aa24.45■■□□□ 1.5
LRRK1-210ENST00000534045 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
LRRK1-210ENST00000534045 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
LRRK1-210ENST00000534045 SMC1BQ8NDV3 1235 aa24.44■■□□□ 1.5
LRRK1-210ENST00000534045 PHAXQ9H814 394 aaKnown RBP24.44■■□□□ 1.5
LRRK1-210ENST00000534045 DDNO94850 711 aaPredicted RBP24.43■■□□□ 1.5
LRRK1-210ENST00000534045 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
LRRK1-210ENST00000534045 APLP1P51693 650 aa24.43■■□□□ 1.5
LRRK1-210ENST00000534045 ISCA1Q9BUE6 129 aa24.43■■□□□ 1.5
LRRK1-210ENST00000534045 BBOX1O75936 387 aa24.42■■□□□ 1.5
LRRK1-210ENST00000534045 PSMD1Q99460 953 aa24.42■■□□□ 1.5
LRRK1-210ENST00000534045 IL16Q14005 1332 aa24.41■■□□□ 1.5
LRRK1-210ENST00000534045 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
LRRK1-210ENST00000534045 TSPYL6Q8N831 410 aa24.41■■□□□ 1.5
LRRK1-210ENST00000534045 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
LRRK1-210ENST00000534045 LAMB2P55268 1798 aa24.4■■□□□ 1.5
LRRK1-210ENST00000534045 HSP90B1P14625 803 aaKnown RBP24.4■■□□□ 1.5
LRRK1-210ENST00000534045 TRIM28Q13263 835 aaKnown RBP24.4■■□□□ 1.5
LRRK1-210ENST00000534045 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
LRRK1-210ENST00000534045 MYD88Q99836 296 aa24.4■■□□□ 1.5
LRRK1-210ENST00000534045 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
LRRK1-210ENST00000534045 WDR63Q8IWG1 891 aa24.39■■□□□ 1.49
LRRK1-210ENST00000534045 ABCC4O15439 1325 aa24.38■■□□□ 1.49
LRRK1-210ENST00000534045 IQCA1LA6NCM1 817 aa24.38■■□□□ 1.49
LRRK1-210ENST00000534045 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
LRRK1-210ENST00000534045 EIF6P56537 245 aaKnown RBP24.37■■□□□ 1.49
LRRK1-210ENST00000534045 SUPT20HQ8NEM7 779 aa24.37■■□□□ 1.49
LRRK1-210ENST00000534045 IRS4O14654 1257 aaPredicted RBP24.36■■□□□ 1.49
LRRK1-210ENST00000534045 GRAPQ13588 217 aa24.36■■□□□ 1.49
LRRK1-210ENST00000534045 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
LRRK1-210ENST00000534045 GRAPLQ8TC17 118 aaPredicted RBP24.36■■□□□ 1.49
LRRK1-210ENST00000534045 POTECB2RU33 542 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 SLC4A2P04920 1241 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 NEXNQ0ZGT2 675 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 DPP8Q6V1X1 898 aaPredicted RBP24.35■■□□□ 1.49
LRRK1-210ENST00000534045 TMC4Q7Z404 712 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 MPNDQ8N594 471 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 ZBTB38Q8NAP3 1195 aaPredicted RBP24.35■■□□□ 1.49
LRRK1-210ENST00000534045 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 METTL22Q9BUU2 404 aaPredicted RBP24.35■■□□□ 1.49
LRRK1-210ENST00000534045 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
LRRK1-210ENST00000534045 KSR2Q6VAB6 950 aa24.34■■□□□ 1.49
LRRK1-210ENST00000534045 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
LRRK1-210ENST00000534045 FZD9O00144 591 aa24.33■■□□□ 1.49
LRRK1-210ENST00000534045 PPIP5K2O43314 1243 aa24.33■■□□□ 1.49
LRRK1-210ENST00000534045 SF3B3Q15393 1217 aaKnown RBP24.33■■□□□ 1.49
LRRK1-210ENST00000534045 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms