RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
CMTM1-219ENST00000533953 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
CMTM1-219ENST00000533953 NUP98P52948 1817 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 FLIIQ13045 1269 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
CMTM1-219ENST00000533953 ADCY9O60503 1353 aa17.16■□□□□ 0.34
CMTM1-219ENST00000533953 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
CMTM1-219ENST00000533953 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
CMTM1-219ENST00000533953 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
CMTM1-219ENST00000533953 KLRG2A4D1S0 409 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-219ENST00000533953 F6X3S4 739 aa17.15■□□□□ 0.34
CMTM1-219ENST00000533953 YY1P25490 414 aa17.15■□□□□ 0.34
CMTM1-219ENST00000533953 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-219ENST00000533953 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
CMTM1-219ENST00000533953 ANKRD31Q8N7Z5 1873 aa17.15■□□□□ 0.34
CMTM1-219ENST00000533953 C21orf2O43822 256 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
CMTM1-219ENST00000533953 SLC10A5Q5PT55 438 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 OLFM4Q6UX06 510 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 MASTLQ96GX5 879 aa17.14■□□□□ 0.33
CMTM1-219ENST00000533953 NPR1P16066 1061 aa17.13■□□□□ 0.33
CMTM1-219ENST00000533953 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
CMTM1-219ENST00000533953 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
CMTM1-219ENST00000533953 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
CMTM1-219ENST00000533953 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
CMTM1-219ENST00000533953 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
CMTM1-219ENST00000533953 RASSF7Q02833 373 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
CMTM1-219ENST00000533953 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
CMTM1-219ENST00000533953 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
CMTM1-219ENST00000533953 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-219ENST00000533953 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
CMTM1-219ENST00000533953 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-219ENST00000533953 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
CMTM1-219ENST00000533953 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
CMTM1-219ENST00000533953 PRELPP51888 382 aa17.09■□□□□ 0.33
CMTM1-219ENST00000533953 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
CMTM1-219ENST00000533953 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
CMTM1-219ENST00000533953 UTRNP46939 3433 aa17.08■□□□□ 0.33
CMTM1-219ENST00000533953 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
CMTM1-219ENST00000533953 SLC4A10Q6U841 1118 aa17.08■□□□□ 0.32
CMTM1-219ENST00000533953 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-219ENST00000533953 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-219ENST00000533953 ARFGEF2Q9Y6D5 1785 aa17.07■□□□□ 0.32
CMTM1-219ENST00000533953 NFKBIEO00221 500 aa17.07■□□□□ 0.32
CMTM1-219ENST00000533953 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
CMTM1-219ENST00000533953 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
CMTM1-219ENST00000533953 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
CMTM1-219ENST00000533953 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
CMTM1-219ENST00000533953 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
CMTM1-219ENST00000533953 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
CMTM1-219ENST00000533953 BEND3Q5T5X7 828 aa17.06■□□□□ 0.32
CMTM1-219ENST00000533953 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
CMTM1-219ENST00000533953 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
CMTM1-219ENST00000533953 GCKRQ14397 625 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 ANKRD36CQ5JPF3 1778 aa17.05■□□□□ 0.32
CMTM1-219ENST00000533953 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 ABCC4O15439 1325 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 H7C1W4 665 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
CMTM1-219ENST00000533953 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
CMTM1-219ENST00000533953 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
CMTM1-219ENST00000533953 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
CMTM1-219ENST00000533953 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
CMTM1-219ENST00000533953 ALDH1L2Q3SY69 923 aa17.03■□□□□ 0.32
CMTM1-219ENST00000533953 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
CMTM1-219ENST00000533953 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
CMTM1-219ENST00000533953 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
CMTM1-219ENST00000533953 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
CMTM1-219ENST00000533953 PDE8AO60658 829 aa17.02■□□□□ 0.32
CMTM1-219ENST00000533953 BCAR3O75815 825 aa17.02■□□□□ 0.32
CMTM1-219ENST00000533953 CASP7P55210 303 aa17.02■□□□□ 0.32
CMTM1-219ENST00000533953 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
CMTM1-219ENST00000533953 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
CMTM1-219ENST00000533953 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
CMTM1-219ENST00000533953 GRAPQ13588 217 aa17■□□□□ 0.31
CMTM1-219ENST00000533953 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
CMTM1-219ENST00000533953 SRCIN1Q9C0H9 1055 aa17■□□□□ 0.31
CMTM1-219ENST00000533953 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
CMTM1-219ENST00000533953 CDHR2Q9BYE9 1310 aa16.99■□□□□ 0.31
CMTM1-219ENST00000533953 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
CMTM1-219ENST00000533953 TTLL11Q8NHH1 800 aa16.99■□□□□ 0.31
CMTM1-219ENST00000533953 TAOK3Q9H2K8 898 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms