RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
PACS1-213ENST00000533756 CARD11Q9BXL7 1154 aa12.48□□□□□ -0.41
PACS1-213ENST00000533756 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
PACS1-213ENST00000533756 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
PACS1-213ENST00000533756 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
PACS1-213ENST00000533756 MKI67P46013 3256 aaKnown RBP12.47□□□□□ -0.41
PACS1-213ENST00000533756 A0A0C4DFX4 3053 aa12.46□□□□□ -0.41
PACS1-213ENST00000533756 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
PACS1-213ENST00000533756 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
PACS1-213ENST00000533756 ZNF296Q8WUU4 475 aaPredicted RBP12.46□□□□□ -0.41
PACS1-213ENST00000533756 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.42
PACS1-213ENST00000533756 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 STARD3NLO95772 234 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 SLC10A3P09131 477 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
PACS1-213ENST00000533756 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 C2orf69Q8N8R5 385 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 SCN11AQ9UI33 1791 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 COL4A5P29400 1685 aa12.45□□□□□ -0.42
PACS1-213ENST00000533756 SLC52A2Q9HAB3 445 aa12.44□□□□□ -0.42
PACS1-213ENST00000533756 GBA2Q9HCG7 927 aaPredicted RBP12.44□□□□□ -0.42
PACS1-213ENST00000533756 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
PACS1-213ENST00000533756 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
PACS1-213ENST00000533756 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
PACS1-213ENST00000533756 HIRAP54198 1017 aaPredicted RBP12.43□□□□□ -0.42
PACS1-213ENST00000533756 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
PACS1-213ENST00000533756 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
PACS1-213ENST00000533756 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
PACS1-213ENST00000533756 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
PACS1-213ENST00000533756 SCN7AQ01118 1682 aa12.42□□□□□ -0.42
PACS1-213ENST00000533756 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
PACS1-213ENST00000533756 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
PACS1-213ENST00000533756 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
PACS1-213ENST00000533756 TESK2Q96S53 571 aa12.42□□□□□ -0.42
PACS1-213ENST00000533756 CUL9Q8IWT3 2517 aa12.42□□□□□ -0.42
PACS1-213ENST00000533756 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
PACS1-213ENST00000533756 CAMTA2O94983 1202 aa12.41□□□□□ -0.42
PACS1-213ENST00000533756 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
PACS1-213ENST00000533756 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
PACS1-213ENST00000533756 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
PACS1-213ENST00000533756 GPR25O00155 361 aa12.4□□□□□ -0.42
PACS1-213ENST00000533756 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
PACS1-213ENST00000533756 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
PACS1-213ENST00000533756 CXCL9Q07325 125 aa12.4□□□□□ -0.42
PACS1-213ENST00000533756 CLEC4GQ6UXB4 293 aa12.4□□□□□ -0.42
PACS1-213ENST00000533756 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
PACS1-213ENST00000533756 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
PACS1-213ENST00000533756 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
PACS1-213ENST00000533756 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
PACS1-213ENST00000533756 COL6A3P12111 3177 aa12.38□□□□□ -0.43
PACS1-213ENST00000533756 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
PACS1-213ENST00000533756 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
PACS1-213ENST00000533756 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
PACS1-213ENST00000533756 H0YGN5 161 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 H7C1D1 291 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 FKTNO75072 461 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
PACS1-213ENST00000533756 DLK2Q6UY11 383 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
PACS1-213ENST00000533756 RBBP6Q7Z6E9 1792 aaKnown RBP12.36□□□□□ -0.43
PACS1-213ENST00000533756 PPIP5K2O43314 1243 aa12.36□□□□□ -0.43
PACS1-213ENST00000533756 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
PACS1-213ENST00000533756 RASAL3Q86YV0 1011 aa12.36□□□□□ -0.43
PACS1-213ENST00000533756 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
PACS1-213ENST00000533756 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
PACS1-213ENST00000533756 MRC1P22897 1456 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 TM4SF4P48230 202 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 TNIP1Q15025 636 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
PACS1-213ENST00000533756 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
PACS1-213ENST00000533756 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
PACS1-213ENST00000533756 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
PACS1-213ENST00000533756 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
PACS1-213ENST00000533756 COL25A1Q9BXS0 654 aaPredicted RBP12.34□□□□□ -0.43
PACS1-213ENST00000533756 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
PACS1-213ENST00000533756 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 RGL2O15211 777 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
PACS1-213ENST00000533756 FKBP1BP68106 108 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 AOC3Q16853 763 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
PACS1-213ENST00000533756 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
PACS1-213ENST00000533756 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
PACS1-213ENST00000533756 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
PACS1-213ENST00000533756 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 A1BGP04217 495 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
PACS1-213ENST00000533756 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 DPF2Q92785 391 aa12.31□□□□□ -0.44
PACS1-213ENST00000533756 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
PACS1-213ENST00000533756 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
PACS1-213ENST00000533756 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms