RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 SCN7AQ01118 1682 aa12.15□□□□□ -0.46
BEST3-207ENST00000533674 PRELPP51888 382 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
BEST3-207ENST00000533674 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
BEST3-207ENST00000533674 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
BEST3-207ENST00000533674 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
BEST3-207ENST00000533674 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
BEST3-207ENST00000533674 SETDB2Q96T68 719 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
BEST3-207ENST00000533674 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
BEST3-207ENST00000533674 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
BEST3-207ENST00000533674 SOGA3Q5TF21 947 aa12.12□□□□□ -0.47
BEST3-207ENST00000533674 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
BEST3-207ENST00000533674 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
BEST3-207ENST00000533674 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
BEST3-207ENST00000533674 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
BEST3-207ENST00000533674 IL6STP40189 918 aaPredicted RBP12.11□□□□□ -0.47
BEST3-207ENST00000533674 DICER1Q9UPY3 1922 aaKnown RBP12.11□□□□□ -0.47
BEST3-207ENST00000533674 FER1L6Q2WGJ9 1857 aa12.1□□□□□ -0.47
BEST3-207ENST00000533674 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
BEST3-207ENST00000533674 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
BEST3-207ENST00000533674 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
BEST3-207ENST00000533674 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
BEST3-207ENST00000533674 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
BEST3-207ENST00000533674 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
BEST3-207ENST00000533674 POTECB2RU33 542 aa12.09□□□□□ -0.47
BEST3-207ENST00000533674 PPP1R37O75864 691 aa12.09□□□□□ -0.47
BEST3-207ENST00000533674 DDNO94850 711 aaPredicted RBP12.09□□□□□ -0.47
BEST3-207ENST00000533674 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
BEST3-207ENST00000533674 NBPF5PQ86XG9 351 aaPredicted RBP12.09□□□□□ -0.47
BEST3-207ENST00000533674 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
BEST3-207ENST00000533674 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
BEST3-207ENST00000533674 SIPA1L3O60292 1781 aaPredicted RBP12.08□□□□□ -0.48
BEST3-207ENST00000533674 BCORQ6W2J9 1755 aa12.08□□□□□ -0.48
BEST3-207ENST00000533674 A1BGP04217 495 aa12.08□□□□□ -0.48
BEST3-207ENST00000533674 IL17REQ8NFR9 667 aa12.08□□□□□ -0.48
BEST3-207ENST00000533674 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
BEST3-207ENST00000533674 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 SRGNP10124 158 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
BEST3-207ENST00000533674 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 EAPPQ56P03 285 aaPredicted RBP12.07□□□□□ -0.48
BEST3-207ENST00000533674 RTF1Q92541 710 aaKnown RBP12.07□□□□□ -0.48
BEST3-207ENST00000533674 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
BEST3-207ENST00000533674 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
BEST3-207ENST00000533674 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
BEST3-207ENST00000533674 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
BEST3-207ENST00000533674 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
BEST3-207ENST00000533674 FAM177BA6PVY3 158 aa12.05□□□□□ -0.48
BEST3-207ENST00000533674 NPR1P16066 1061 aa12.05□□□□□ -0.48
BEST3-207ENST00000533674 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
BEST3-207ENST00000533674 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
BEST3-207ENST00000533674 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
BEST3-207ENST00000533674 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
BEST3-207ENST00000533674 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
BEST3-207ENST00000533674 SCN4AP35499 1836 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
BEST3-207ENST00000533674 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
BEST3-207ENST00000533674 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
BEST3-207ENST00000533674 CNTNAP1P78357 1384 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
BEST3-207ENST00000533674 PCNTO95613 3336 aa12.03□□□□□ -0.48
BEST3-207ENST00000533674 TMEM88BA6NKF7 163 aa12.03□□□□□ -0.48
BEST3-207ENST00000533674 KCNQ3O43525 872 aa12.03□□□□□ -0.48
BEST3-207ENST00000533674 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
BEST3-207ENST00000533674 RTKN2Q8IZC4 609 aa12.03□□□□□ -0.48
BEST3-207ENST00000533674 TAF1DQ9H5J8 278 aaPredicted RBP12.03□□□□□ -0.48
BEST3-207ENST00000533674 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
BEST3-207ENST00000533674 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
BEST3-207ENST00000533674 FOXN1O15353 648 aa12.02□□□□□ -0.49
BEST3-207ENST00000533674 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
BEST3-207ENST00000533674 ALDH1B1P30837 517 aa12.02□□□□□ -0.49
BEST3-207ENST00000533674 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
BEST3-207ENST00000533674 MCM10Q7L590 875 aa12.02□□□□□ -0.49
BEST3-207ENST00000533674 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.49
BEST3-207ENST00000533674 JDP2Q8WYK2 163 aa12.02□□□□□ -0.49
BEST3-207ENST00000533674 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
BEST3-207ENST00000533674 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 NEFMP07197 916 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 EPHX2P34913 555 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
BEST3-207ENST00000533674 RNF123Q5XPI4 1314 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
BEST3-207ENST00000533674 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
BEST3-207ENST00000533674 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms