RNA–Protein interactions for RNA: ENST00000533660.1

MS4A6A-219, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-219ENST00000533660 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L12C9JPN9 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L21D6R901 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 CHRNA4P43681 627 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 DPYDQ12882 1025 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 COL9A3Q14050 684 aaPredicted RBP6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 MICALL1Q8N3F8 863 aa6.9□□□□□ -1.3
MS4A6A-219ENST00000533660 M0R082 166 aa6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 FOXO3O43524 673 aa6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 ZNF417Q8TAU3 575 aa6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 ZNF587Q96SQ5 575 aaPredicted RBP6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
MS4A6A-219ENST00000533660 EPB42P16452 691 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 WEE1P30291 646 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 PCSK7Q16549 785 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 ARXQ96QS3 562 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 NACC1Q96RE7 527 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
MS4A6A-219ENST00000533660 ALBP02768 609 aa6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 NID1P14543 1247 aa6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 LMOD1P29536 600 aaPredicted RBP6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 MYO19Q96H55 970 aa6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 GSX2Q9BZM3 304 aa6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.31
MS4A6A-219ENST00000533660 LILRB5O75023 590 aa6.86□□□□□ -1.31
MS4A6A-219ENST00000533660 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
MS4A6A-219ENST00000533660 GATA4P43694 442 aa6.86□□□□□ -1.31
MS4A6A-219ENST00000533660 CCINQ13939 588 aa6.86□□□□□ -1.31
MS4A6A-219ENST00000533660 CHMP7Q8WUX9 453 aaPredicted RBP6.86□□□□□ -1.31
MS4A6A-219ENST00000533660 APBA3O96018 575 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 FURINP09958 794 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 INPP5BP32019 993 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 TRIM28Q13263 835 aaKnown RBP6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 CFAP70Q5T0N1 1121 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 BHMTQ93088 406 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 SLC6A14Q9UN76 642 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 BCS1LQ9Y276 419 aa6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.85□□□□□ -1.31
MS4A6A-219ENST00000533660 ILDR2Q71H61 639 aa6.84□□□□□ -1.31
MS4A6A-219ENST00000533660 RAB44Q7Z6P3 723 aaPredicted RBP6.84□□□□□ -1.31
MS4A6A-219ENST00000533660 UBE2OQ9C0C9 1292 aaKnown RBP6.84□□□□□ -1.31
MS4A6A-219ENST00000533660 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
MS4A6A-219ENST00000533660 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
MS4A6A-219ENST00000533660 FAM200AQ8TCP9 573 aa6.83□□□□□ -1.32
MS4A6A-219ENST00000533660 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
MS4A6A-219ENST00000533660 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
MS4A6A-219ENST00000533660 C9orf172C9J069 976 aa6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 ELNP15502 786 aa6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 ARSDP51689 593 aa6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 C11orf91Q3C1V1 193 aa6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 TTC9Q92623 222 aa6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
MS4A6A-219ENST00000533660 EGFRP00533 1210 aa6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 IDH3AP50213 366 aa6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 DTWD1Q8N5C7 304 aa6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 TRPM4Q8TD43 1214 aa6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 DNAJB12Q9NXW2 375 aaKnown RBP6.81□□□□□ -1.32
MS4A6A-219ENST00000533660 ACIN1Q9UKV3 1341 aaKnown RBP6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 NFKB1P19838 968 aa6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 ARID4AP29374 1257 aaPredicted RBP6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 RAC1P63000 192 aa6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 NRG1Q02297 640 aaPredicted RBP6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 DGKZQ13574 1117 aa6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 C8orf86Q6ZUL3 223 aa6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 JPH1Q9HDC5 661 aaPredicted RBP6.8□□□□□ -1.32
MS4A6A-219ENST00000533660 A0A0A0MRY4 1105 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 MICAL2O94851 1124 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 AFF1P51825 1210 aaKnown RBP6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 DOC2BQ14184 412 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 NKAPLQ5M9Q1 402 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 KLK14Q9P0G3 267 aa6.79□□□□□ -1.32
MS4A6A-219ENST00000533660 RGS9O75916 674 aaPredicted RBP6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 RFX1P22670 979 aa6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 GPLD1P80108 840 aa6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 ADGRE1Q14246 886 aa6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 RSPO4Q2I0M5 234 aaPredicted RBP6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 NOVA2Q9UNW9 492 aaKnown RBP6.78□□□□□ -1.32
MS4A6A-219ENST00000533660 HOXD8P13378 290 aaPredicted RBP6.77□□□□□ -1.33
MS4A6A-219ENST00000533660 NRLP54845 237 aa6.77□□□□□ -1.33
MS4A6A-219ENST00000533660 XP32Q5T750 250 aa6.77□□□□□ -1.33
MS4A6A-219ENST00000533660 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
MS4A6A-219ENST00000533660 TPSG1Q9NRR2 321 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms