RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 UBAP1LF5GYI3 381 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 UBE3BQ7Z3V4 1068 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 TTC14Q96N46 770 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 LMBRD1Q9NUN5 540 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 TLR7Q9NYK1 1049 aaKnown RBP23.28■■□□□ 1.32
UBXN1-215ENST00000533476 TNS2Q63HR2 1409 aa23.28■■□□□ 1.32
UBXN1-215ENST00000533476 NBPF26B4DH59 902 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 CASP7P55210 303 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 NBPF14Q5TI25 921 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 NBPF10Q6P3W6 841 aaKnown RBP23.27■■□□□ 1.32
UBXN1-215ENST00000533476 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
UBXN1-215ENST00000533476 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 NBPF15Q8N660 670 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 DDX49Q9Y6V7 483 aaKnown RBP23.27■■□□□ 1.32
UBXN1-215ENST00000533476 BRD1O95696 1058 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 KCNB2Q92953 911 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 ARXQ96QS3 562 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 SNRKQ9NRH2 765 aa23.27■■□□□ 1.32
UBXN1-215ENST00000533476 A0A087WZG4 1122 aa23.26■■□□□ 1.31
UBXN1-215ENST00000533476 ATP5J2-PTCD1G3V325 749 aa23.25■■□□□ 1.31
UBXN1-215ENST00000533476 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
UBXN1-215ENST00000533476 PTPN12Q05209 780 aaKnown RBP23.25■■□□□ 1.31
UBXN1-215ENST00000533476 TJP1Q07157 1748 aa23.25■■□□□ 1.31
UBXN1-215ENST00000533476 PTH1RQ03431 593 aa23.25■■□□□ 1.31
UBXN1-215ENST00000533476 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
UBXN1-215ENST00000533476 JARID2Q92833 1246 aaPredicted RBP23.23■■□□□ 1.31
UBXN1-215ENST00000533476 TOGARAM1Q9Y4F4 1720 aa23.23■■□□□ 1.31
UBXN1-215ENST00000533476 TM6SF1Q9BZW5 370 aa23.23■■□□□ 1.31
UBXN1-215ENST00000533476 H7C1W4 665 aa23.22■■□□□ 1.31
UBXN1-215ENST00000533476 NMIQ13287 307 aaPredicted RBP23.22■■□□□ 1.31
UBXN1-215ENST00000533476 PANK2Q9BZ23 570 aa23.22■■□□□ 1.31
UBXN1-215ENST00000533476 BOLA2Q9H3K6 86 aa23.22■■□□□ 1.31
UBXN1-215ENST00000533476 AK2P54819 239 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 GAS2L3Q86XJ1 694 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 FAM227BQ96M60 508 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 FSD1Q9BTV5 496 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 LIMCH1Q9UPQ0 1083 aa23.21■■□□□ 1.31
UBXN1-215ENST00000533476 MED23Q9ULK4 1368 aa23.2■■□□□ 1.31
UBXN1-215ENST00000533476 ATP5JP18859 108 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 CASTP20810 708 aaKnown RBP23.2■■□□□ 1.3
UBXN1-215ENST00000533476 TFCP2Q12800 502 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
UBXN1-215ENST00000533476 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 STRN4Q9NRL3 753 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 CWC25Q9NXE8 425 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-215ENST00000533476 RFX7Q2KHR2 1363 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 TOM1O60784 492 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 RUFY3Q7L099 469 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
UBXN1-215ENST00000533476 MAP4K1Q92918 833 aa23.2■■□□□ 1.3
UBXN1-215ENST00000533476 DBNLQ9UJU6 430 aaKnown RBP23.2■■□□□ 1.3
UBXN1-215ENST00000533476 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
UBXN1-215ENST00000533476 EVA1CP58658 441 aa23.19■■□□□ 1.3
UBXN1-215ENST00000533476 FOXO4P98177 505 aa23.19■■□□□ 1.3
UBXN1-215ENST00000533476 ZSWIM6Q9HCJ5 1215 aa23.19■■□□□ 1.3
UBXN1-215ENST00000533476 JCADQ9P266 1359 aa23.18■■□□□ 1.3
UBXN1-215ENST00000533476 A1BGP04217 495 aa23.18■■□□□ 1.3
UBXN1-215ENST00000533476 VPS53Q5VIR6 699 aa23.18■■□□□ 1.3
UBXN1-215ENST00000533476 RBM8AQ9Y5S9 174 aaKnown RBP23.18■■□□□ 1.3
UBXN1-215ENST00000533476 A0A0D9SFI3 127 aa23.18■■□□□ 1.3
UBXN1-215ENST00000533476 ZKSCAN1P17029 563 aaPredicted RBP23.18■■□□□ 1.3
UBXN1-215ENST00000533476 LMBR1LQ6UX01 489 aa23.18■■□□□ 1.3
UBXN1-215ENST00000533476 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
UBXN1-215ENST00000533476 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
UBXN1-215ENST00000533476 ZNF445P59923 1031 aa23.17■■□□□ 1.3
UBXN1-215ENST00000533476 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-215ENST00000533476 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-215ENST00000533476 CYP46A1Q9Y6A2 500 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 RPAP1Q9BWH6 1393 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-215ENST00000533476 ADCK5Q3MIX3 580 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 GPT2Q8TD30 523 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 RRAGDQ9NQL2 400 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-215ENST00000533476 PDRG1Q9NUG6 133 aa23.16■■□□□ 1.3
UBXN1-215ENST00000533476 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-215ENST00000533476 ROBO1Q9Y6N7 1651 aa23.15■■□□□ 1.3
UBXN1-215ENST00000533476 CAVIN1Q6NZI2 390 aaKnown RBP23.15■■□□□ 1.3
UBXN1-215ENST00000533476 CPA1P15085 419 aa23.14■■□□□ 1.3
UBXN1-215ENST00000533476 KCNJ4P48050 445 aa23.14■■□□□ 1.3
UBXN1-215ENST00000533476 ZSCAN31Q96LW9 406 aaPredicted RBP23.14■■□□□ 1.3
UBXN1-215ENST00000533476 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.3
UBXN1-215ENST00000533476 NCLP19338 710 aaKnown RBP23.14■■□□□ 1.29
UBXN1-215ENST00000533476 ZSCAN23Q3MJ62 389 aa23.14■■□□□ 1.29
UBXN1-215ENST00000533476 CHAMP1Q96JM3 812 aa23.14■■□□□ 1.29
UBXN1-215ENST00000533476 ZBTB3Q9H5J0 574 aa23.14■■□□□ 1.29
UBXN1-215ENST00000533476 SLC27A2O14975 620 aa23.13■■□□□ 1.29
UBXN1-215ENST00000533476 MBD3O95983 291 aa23.13■■□□□ 1.29
UBXN1-215ENST00000533476 DBNDD2Q9BQY9 259 aa23.13■■□□□ 1.29
UBXN1-215ENST00000533476 SH2B1Q9NRF2 756 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-215ENST00000533476 RNF20Q5VTR2 975 aa23.12■■□□□ 1.29
UBXN1-215ENST00000533476 HAUS7Q99871 368 aa23.12■■□□□ 1.29
UBXN1-215ENST00000533476 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
UBXN1-215ENST00000533476 PSMA5P28066 241 aa23.12■■□□□ 1.29
UBXN1-215ENST00000533476 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms