RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 UTYO14607 1347 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 MRC1P22897 1456 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 KRT85P78386 507 aa19.8■□□□□ 0.76
CTSB-228ENST00000533455 TTC6Q86TZ1 520 aa19.8■□□□□ 0.76
CTSB-228ENST00000533455 AACSQ86V21 672 aa19.8■□□□□ 0.76
CTSB-228ENST00000533455 KIAA1524Q8TCG1 905 aa19.8■□□□□ 0.76
CTSB-228ENST00000533455 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
CTSB-228ENST00000533455 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
CTSB-228ENST00000533455 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
CTSB-228ENST00000533455 PDCP20941 246 aa19.8■□□□□ 0.76
CTSB-228ENST00000533455 SLC27A2O14975 620 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 KCNA6P17658 529 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
CTSB-228ENST00000533455 TPRNQ4KMQ1 711 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 LARP1BQ659C4 914 aaKnown RBP19.79■□□□□ 0.76
CTSB-228ENST00000533455 ZNF530Q6P9A1 599 aaPredicted RBP19.79■□□□□ 0.76
CTSB-228ENST00000533455 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 KCNF1Q9H3M0 494 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 MED23Q9ULK4 1368 aa19.79■□□□□ 0.76
CTSB-228ENST00000533455 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 ANKRD1Q15327 319 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
CTSB-228ENST00000533455 C17orf53Q8N3J3 647 aaPredicted RBP19.78■□□□□ 0.76
CTSB-228ENST00000533455 FAM200AQ8TCP9 573 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 ADAMTS7Q9UKP4 1686 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 PXDNQ92626 1479 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 GOLGA6L6A8MZA4 724 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
CTSB-228ENST00000533455 FAM227BQ96M60 508 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 PHF8Q9UPP1 1060 aa19.78■□□□□ 0.76
CTSB-228ENST00000533455 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
CTSB-228ENST00000533455 RNMTO43148 476 aaKnown RBP19.77■□□□□ 0.76
CTSB-228ENST00000533455 GIGYF1O75420 1035 aaPredicted RBP19.77■□□□□ 0.76
CTSB-228ENST00000533455 SASH1O94885 1247 aa19.77■□□□□ 0.76
CTSB-228ENST00000533455 MAP3K11Q16584 847 aa19.77■□□□□ 0.76
CTSB-228ENST00000533455 CDC37L1Q7L3B6 337 aa19.77■□□□□ 0.76
CTSB-228ENST00000533455 CCDC94Q9BW85 323 aaPredicted RBP19.77■□□□□ 0.76
CTSB-228ENST00000533455 NUP62CLQ9H1M0 184 aa19.77■□□□□ 0.76
CTSB-228ENST00000533455 AMOTQ4VCS5 1084 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 RNF20Q5VTR2 975 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 LINS1Q8NG48 757 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 GRM8O00222 908 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 KCNJ4P48050 445 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 SMAP1Q8IYB5 467 aaPredicted RBP19.76■□□□□ 0.75
CTSB-228ENST00000533455 ZNF710Q8N1W2 664 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 EAF2Q96CJ1 260 aaPredicted RBP19.76■□□□□ 0.75
CTSB-228ENST00000533455 KAZALD1Q96I82 304 aa19.76■□□□□ 0.75
CTSB-228ENST00000533455 RPS6KB1P23443 525 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 BLOC1S2Q6QNY1 142 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 SUCLG2Q96I99 432 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 HMG20BQ9P0W2 317 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 PYCARDQ9ULZ3 195 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 MRVI1Q9Y6F6 885 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 TYRO3Q06418 890 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 G3BP1Q13283 466 aaKnown RBP eCLIP19.75■□□□□ 0.75
CTSB-228ENST00000533455 CWF19L2Q2TBE0 894 aaKnown RBP19.75■□□□□ 0.75
CTSB-228ENST00000533455 MPRIPQ6WCQ1 1025 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 RBM43Q6ZSC3 357 aaKnown RBP19.75■□□□□ 0.75
CTSB-228ENST00000533455 KCNH5Q8NCM2 988 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 SCAND2PQ9GZW5 306 aaPredicted RBP19.75■□□□□ 0.75
CTSB-228ENST00000533455 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
CTSB-228ENST00000533455 A0A0D9SFI3 127 aa19.74■□□□□ 0.75
CTSB-228ENST00000533455 LIG1P18858 919 aa19.74■□□□□ 0.75
CTSB-228ENST00000533455 PLCB2Q00722 1185 aa19.74■□□□□ 0.75
CTSB-228ENST00000533455 DDX54Q8TDD1 881 aaKnown RBP19.74■□□□□ 0.75
CTSB-228ENST00000533455 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
CTSB-228ENST00000533455 DTNBO60941 627 aa19.73■□□□□ 0.75
CTSB-228ENST00000533455 DDX19AQ9NUU7 478 aaKnown RBP19.73■□□□□ 0.75
CTSB-228ENST00000533455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.73■□□□□ 0.75
CTSB-228ENST00000533455 TOB2Q14106 344 aaPredicted RBP19.73■□□□□ 0.75
CTSB-228ENST00000533455 BICC1Q9H694 974 aaKnown RBP19.73■□□□□ 0.75
CTSB-228ENST00000533455 ZBTB7CA1YPR0 619 aa19.72■□□□□ 0.75
CTSB-228ENST00000533455 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
CTSB-228ENST00000533455 CCDC8Q9H0W5 538 aaPredicted RBP19.72■□□□□ 0.75
CTSB-228ENST00000533455 MYH15Q9Y2K3 1946 aa19.72■□□□□ 0.75
CTSB-228ENST00000533455 SLIT3O75094 1523 aa19.71■□□□□ 0.75
CTSB-228ENST00000533455 DDX58O95786 925 aaKnown RBP19.71■□□□□ 0.75
CTSB-228ENST00000533455 COL9A3Q14050 684 aaPredicted RBP19.71■□□□□ 0.75
CTSB-228ENST00000533455 C1orf141Q5JVX7 400 aa19.71■□□□□ 0.75
CTSB-228ENST00000533455 FERMT3Q86UX7 667 aa19.71■□□□□ 0.75
CTSB-228ENST00000533455 TLR7Q9NYK1 1049 aaKnown RBP19.71■□□□□ 0.75
CTSB-228ENST00000533455 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
CTSB-228ENST00000533455 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
CTSB-228ENST00000533455 TNMDQ9H2S6 317 aa19.71■□□□□ 0.75
CTSB-228ENST00000533455 CLSTN2Q9H4D0 955 aa19.71■□□□□ 0.75
CTSB-228ENST00000533455 RFX7Q2KHR2 1363 aa19.7■□□□□ 0.74
CTSB-228ENST00000533455 USPL1Q5W0Q7 1092 aa19.7■□□□□ 0.74
CTSB-228ENST00000533455 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
CTSB-228ENST00000533455 SPC24Q8NBT2 197 aa19.7■□□□□ 0.74
CTSB-228ENST00000533455 LEO1Q8WVC0 666 aaPredicted RBP19.7■□□□□ 0.74
CTSB-228ENST00000533455 SPATA32Q96LK8 384 aa19.7■□□□□ 0.74
CTSB-228ENST00000533455 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
CTSB-228ENST00000533455 FAM173BQ6P4H8 233 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 TSC1Q92574 1164 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 DACT1Q9NYF0 836 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 C5P01031 1676 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms