RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 C9orf78Q9NZ63 289 aaPredicted RBP26.63■■□□□ 1.85
PTP4A2-215ENST00000533408 TRMT112Q9UI30 125 aaKnown RBP26.63■■□□□ 1.85
PTP4A2-215ENST00000533408 ARFGEF2Q9Y6D5 1785 aa26.62■■□□□ 1.85
PTP4A2-215ENST00000533408 ZBTB7AO95365 584 aa26.62■■□□□ 1.85
PTP4A2-215ENST00000533408 MSL1Q68DK7 614 aa26.62■■□□□ 1.85
PTP4A2-215ENST00000533408 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
PTP4A2-215ENST00000533408 SERPINB2P05120 415 aa26.61■■□□□ 1.85
PTP4A2-215ENST00000533408 CWF19L2Q2TBE0 894 aaKnown RBP26.61■■□□□ 1.85
PTP4A2-215ENST00000533408 ZBTB38Q8NAP3 1195 aaPredicted RBP26.61■■□□□ 1.85
PTP4A2-215ENST00000533408 NUP98P52948 1817 aa26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 PCCAP05165 728 aaPredicted RBP26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 ST5P78524 1137 aa26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 ITPRIPQ8IWB1 547 aa26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 CNBD1Q8NA66 436 aa26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 DDX19BQ9UMR2 479 aa26.6■■□□□ 1.85
PTP4A2-215ENST00000533408 POLRMTO00411 1230 aaKnown RBP26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 GNAI3P08754 354 aa26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 SUSD4Q5VX71 490 aa26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 TMEM57Q8N5G2 664 aa26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 ATF5Q9Y2D1 282 aaPredicted RBP26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 UBN2Q6ZU65 1347 aa26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 SH3TC1Q8TE82 1336 aa26.59■■□□□ 1.85
PTP4A2-215ENST00000533408 CASZ1Q86V15 1759 aa26.58■■□□□ 1.85
PTP4A2-215ENST00000533408 GRM8O00222 908 aa26.58■■□□□ 1.85
PTP4A2-215ENST00000533408 PANK1Q8TE04 598 aa26.58■■□□□ 1.85
PTP4A2-215ENST00000533408 MVPQ14764 893 aaKnown RBP26.57■■□□□ 1.84
PTP4A2-215ENST00000533408 H7C1W4 665 aa26.56■■□□□ 1.84
PTP4A2-215ENST00000533408 FAM177BA6PVY3 158 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 NTSR2O95665 410 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 DDR1Q08345 913 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 AAMPQ13685 434 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 PDZRN3Q9UPQ7 1066 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 ANKRD36CQ5JPF3 1778 aa26.55■■□□□ 1.84
PTP4A2-215ENST00000533408 UBTFL1P0CB47 393 aaPredicted RBP26.54■■□□□ 1.84
PTP4A2-215ENST00000533408 RLBP1P12271 317 aa26.54■■□□□ 1.84
PTP4A2-215ENST00000533408 SLC10A5Q5PT55 438 aa26.54■■□□□ 1.84
PTP4A2-215ENST00000533408 UTYO14607 1347 aa26.54■■□□□ 1.84
PTP4A2-215ENST00000533408 CDHR2Q9BYE9 1310 aa26.54■■□□□ 1.84
PTP4A2-215ENST00000533408 UBE3BQ7Z3V4 1068 aa26.53■■□□□ 1.84
PTP4A2-215ENST00000533408 USP44Q9H0E7 712 aa26.53■■□□□ 1.84
PTP4A2-215ENST00000533408 TNNQ9UQP3 1299 aa26.53■■□□□ 1.84
PTP4A2-215ENST00000533408 COG6Q9Y2V7 657 aa26.53■■□□□ 1.84
PTP4A2-215ENST00000533408 NEFLP07196 543 aa26.52■■□□□ 1.84
PTP4A2-215ENST00000533408 FAM89AQ96GI7 184 aa26.52■■□□□ 1.84
PTP4A2-215ENST00000533408 IRS4O14654 1257 aaPredicted RBP26.51■■□□□ 1.83
PTP4A2-215ENST00000533408 PDE6BP35913 854 aa26.51■■□□□ 1.83
PTP4A2-215ENST00000533408 PRR5LQ6MZQ0 368 aa26.51■■□□□ 1.83
PTP4A2-215ENST00000533408 NLRP3Q96P20 1036 aa26.51■■□□□ 1.83
PTP4A2-215ENST00000533408 BRIP1Q9BX63 1249 aa26.51■■□□□ 1.83
PTP4A2-215ENST00000533408 ZBTB7BO15156 539 aaPredicted RBP26.49■■□□□ 1.83
PTP4A2-215ENST00000533408 PDE8AO60658 829 aa26.49■■□□□ 1.83
PTP4A2-215ENST00000533408 ERFEQ4G0M1 354 aa26.49■■□□□ 1.83
PTP4A2-215ENST00000533408 C20orf194Q5TEA3 1177 aa26.49■■□□□ 1.83
PTP4A2-215ENST00000533408 SGIP1Q9BQI5 828 aa26.49■■□□□ 1.83
PTP4A2-215ENST00000533408 GNAI2P04899 355 aa26.48■■□□□ 1.83
PTP4A2-215ENST00000533408 PTGER2P43116 358 aa26.48■■□□□ 1.83
PTP4A2-215ENST00000533408 NUTM1Q86Y26 1132 aa26.48■■□□□ 1.83
PTP4A2-215ENST00000533408 PLA2G12BQ9BX93 195 aa26.48■■□□□ 1.83
PTP4A2-215ENST00000533408 RIC1Q4ADV7 1423 aa26.48■■□□□ 1.83
PTP4A2-215ENST00000533408 NBPF7P0C2Y1 421 aaPredicted RBP26.47■■□□□ 1.83
PTP4A2-215ENST00000533408 COL24A1Q17RW2 1714 aa26.47■■□□□ 1.83
PTP4A2-215ENST00000533408 RTL5Q5HYW3 569 aaPredicted RBP26.46■■□□□ 1.83
PTP4A2-215ENST00000533408 PPP1R1BQ9UD71 204 aaPredicted RBP26.46■■□□□ 1.83
PTP4A2-215ENST00000533408 CD2APQ9Y5K6 639 aa26.46■■□□□ 1.83
PTP4A2-215ENST00000533408 AFDNP55196 1824 aaKnown RBP26.46■■□□□ 1.83
PTP4A2-215ENST00000533408 N4BP2Q86UW6 1770 aaPredicted RBP26.46■■□□□ 1.83
PTP4A2-215ENST00000533408 CASP7P55210 303 aa26.45■■□□□ 1.82
PTP4A2-215ENST00000533408 MEIS3Q99687 375 aa26.45■■□□□ 1.82
PTP4A2-215ENST00000533408 HCLS1P14317 486 aaPredicted RBP26.43■■□□□ 1.82
PTP4A2-215ENST00000533408 TGFB2P61812 414 aa26.43■■□□□ 1.82
PTP4A2-215ENST00000533408 CCDC152Q4G0S7 254 aa26.43■■□□□ 1.82
PTP4A2-215ENST00000533408 H0YIN7 160 aa26.42■■□□□ 1.82
PTP4A2-215ENST00000533408 SF3B3Q15393 1217 aaKnown RBP26.42■■□□□ 1.82
PTP4A2-215ENST00000533408 ZBTB40Q9NUA8 1239 aa26.42■■□□□ 1.82
PTP4A2-215ENST00000533408 KLRG2A4D1S0 409 aaPredicted RBP26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 CTSWP56202 376 aa26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 JARID2Q92833 1246 aaPredicted RBP26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 RPGRQ92834 1020 aaKnown RBP26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 CRBNQ96SW2 442 aa26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 NRXN2Q9P2S2 1712 aa26.41■■□□□ 1.82
PTP4A2-215ENST00000533408 SYNE4Q8N205 404 aa26.4■■□□□ 1.82
PTP4A2-215ENST00000533408 SUCLG2Q96I99 432 aa26.4■■□□□ 1.82
PTP4A2-215ENST00000533408 LRRFIP2Q9Y608 721 aaKnown RBP26.39■■□□□ 1.82
PTP4A2-215ENST00000533408 C10orf71Q711Q0 1435 aa26.39■■□□□ 1.81
PTP4A2-215ENST00000533408 CSF1RP07333 972 aa26.38■■□□□ 1.81
PTP4A2-215ENST00000533408 ALDH1B1P30837 517 aa26.38■■□□□ 1.81
PTP4A2-215ENST00000533408 RPAP2Q8IXW5 612 aaPredicted RBP26.38■■□□□ 1.81
PTP4A2-215ENST00000533408 RBM17Q96I25 401 aaKnown RBP26.38■■□□□ 1.81
PTP4A2-215ENST00000533408 ABCC12Q96J65 1359 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 NPR1P16066 1061 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 FOXO4P98177 505 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 RABL6Q3YEC7 729 aaPredicted RBP26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 CRY2Q49AN0 593 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 DDX46Q7L014 1031 aaKnown RBP26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 CCDC24Q8N4L8 307 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 TTLL11Q8NHH1 800 aa26.37■■□□□ 1.81
PTP4A2-215ENST00000533408 CCDC57Q2TAC2 916 aa26.36■■□□□ 1.81
PTP4A2-215ENST00000533408 LMBR1LQ6UX01 489 aa26.36■■□□□ 1.81
PTP4A2-215ENST00000533408 C2CD5Q86YS7 1000 aa26.36■■□□□ 1.81
PTP4A2-215ENST00000533408 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms