RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
NUP98-220ENST00000533346 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
NUP98-220ENST00000533346 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
NUP98-220ENST00000533346 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
NUP98-220ENST00000533346 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
NUP98-220ENST00000533346 LAMB2P55268 1798 aa12.69□□□□□ -0.38
NUP98-220ENST00000533346 ZC3H4Q9UPT8 1303 aaKnown RBP12.68□□□□□ -0.38
NUP98-220ENST00000533346 NPHP1O15259 732 aa12.68□□□□□ -0.38
NUP98-220ENST00000533346 ERFEQ4G0M1 354 aa12.68□□□□□ -0.38
NUP98-220ENST00000533346 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
NUP98-220ENST00000533346 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
NUP98-220ENST00000533346 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
NUP98-220ENST00000533346 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
NUP98-220ENST00000533346 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
NUP98-220ENST00000533346 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
NUP98-220ENST00000533346 GPTP24298 496 aa12.67□□□□□ -0.38
NUP98-220ENST00000533346 GTF2E1P29083 439 aaPredicted RBP12.67□□□□□ -0.38
NUP98-220ENST00000533346 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
NUP98-220ENST00000533346 ZNF622Q969S3 477 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUP98-220ENST00000533346 CRAMP1Q96RY5 1269 aa12.67□□□□□ -0.38
NUP98-220ENST00000533346 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 KSR2Q6VAB6 950 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
NUP98-220ENST00000533346 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
NUP98-220ENST00000533346 SH3TC1Q8TE82 1336 aa12.65□□□□□ -0.38
NUP98-220ENST00000533346 E9PSI1 815 aa12.65□□□□□ -0.38
NUP98-220ENST00000533346 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
NUP98-220ENST00000533346 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
NUP98-220ENST00000533346 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 NFKBIEO00221 500 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 LMNB1P20700 586 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 SLFN5Q08AF3 891 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 SF3B3Q15393 1217 aaKnown RBP12.64□□□□□ -0.39
NUP98-220ENST00000533346 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
NUP98-220ENST00000533346 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
NUP98-220ENST00000533346 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
NUP98-220ENST00000533346 C21orf2O43822 256 aa12.63□□□□□ -0.39
NUP98-220ENST00000533346 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
NUP98-220ENST00000533346 PRELPP51888 382 aa12.63□□□□□ -0.39
NUP98-220ENST00000533346 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
NUP98-220ENST00000533346 ZBTB38Q8NAP3 1195 aaPredicted RBP12.63□□□□□ -0.39
NUP98-220ENST00000533346 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
NUP98-220ENST00000533346 RBM17Q96I25 401 aaKnown RBP12.63□□□□□ -0.39
NUP98-220ENST00000533346 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
NUP98-220ENST00000533346 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
NUP98-220ENST00000533346 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
NUP98-220ENST00000533346 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
NUP98-220ENST00000533346 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
NUP98-220ENST00000533346 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
NUP98-220ENST00000533346 MYH3P11055 1940 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 BBOX1O75936 387 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 FLIIQ13045 1269 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 G2E3Q7L622 706 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 TMC4Q7Z404 712 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
NUP98-220ENST00000533346 PSMD1Q99460 953 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 VPS33BQ9H267 617 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 TIAM2Q8IVF5 1701 aa12.61□□□□□ -0.39
NUP98-220ENST00000533346 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 IGKV5-2P06315 115 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
NUP98-220ENST00000533346 HSPA6P17066 643 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
NUP98-220ENST00000533346 MIER1Q8N108 512 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 MYD88Q99836 296 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
NUP98-220ENST00000533346 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
NUP98-220ENST00000533346 RASSF7Q02833 373 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 NEXNQ0ZGT2 675 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 SP8Q8IXZ3 490 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 TAF1P21675 1872 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 ABCC4O15439 1325 aa12.59□□□□□ -0.39
NUP98-220ENST00000533346 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 H7C1W4 665 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 IRS4O14654 1257 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 PDE8AO60658 829 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 HCLS1P14317 486 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 GRAPQ13588 217 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms