RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-207ENST00000533308 C20orf194Q5TEA3 1177 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 PANK1Q8TE04 598 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 SPEF2Q9C093 1822 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 TAF1P21675 1872 aa10.04□□□□□ -0.8
COMMD9-207ENST00000533308 RGL2O15211 777 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 ERFEQ4G0M1 354 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 HSP90AB3PQ58FF7 597 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 ZKSCAN2Q63HK3 967 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 NBPF5PQ86XG9 351 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-207ENST00000533308 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 API5Q9BZZ5 524 aaKnown RBP10.03□□□□□ -0.8
COMMD9-207ENST00000533308 PARP3Q9Y6F1 533 aa10.03□□□□□ -0.8
COMMD9-207ENST00000533308 IBTKQ9P2D0 1353 aaPredicted RBP10.02□□□□□ -0.8
COMMD9-207ENST00000533308 POLD1P28340 1107 aa10.02□□□□□ -0.81
COMMD9-207ENST00000533308 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
COMMD9-207ENST00000533308 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
COMMD9-207ENST00000533308 CNBD1Q8NA66 436 aa10.02□□□□□ -0.81
COMMD9-207ENST00000533308 CASP7P55210 303 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 GCKRQ14397 625 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 UBE3BQ7Z3V4 1068 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 CCDC191Q8NCU4 936 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 LINS1Q8NG48 757 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 ARHGAP45Q92619 1136 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 FAM89AQ96GI7 184 aa10.01□□□□□ -0.81
COMMD9-207ENST00000533308 UTP14AQ9BVJ6 771 aaKnown RBP10.01□□□□□ -0.81
COMMD9-207ENST00000533308 CWC25Q9NXE8 425 aaPredicted RBP10.01□□□□□ -0.81
COMMD9-207ENST00000533308 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 CHRNA5P30532 468 aa10□□□□□ -0.81
COMMD9-207ENST00000533308 TRIM28Q13263 835 aaKnown RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 SLC51AQ86UW1 340 aa10□□□□□ -0.81
COMMD9-207ENST00000533308 DZIP1LQ8IYY4 767 aaKnown RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 MEIS3Q99687 375 aa10□□□□□ -0.81
COMMD9-207ENST00000533308 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 SRCIN1Q9C0H9 1055 aa10□□□□□ -0.81
COMMD9-207ENST00000533308 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 TRMT112Q9UI30 125 aaKnown RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 WWC3Q9ULE0 1092 aa10□□□□□ -0.81
COMMD9-207ENST00000533308 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
COMMD9-207ENST00000533308 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 GRM8O00222 908 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 NPHP1O15259 732 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 IPO8O15397 1037 aaKnown RBP9.99□□□□□ -0.81
COMMD9-207ENST00000533308 ALDH1L1O75891 902 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 NBPF7P0C2Y1 421 aaPredicted RBP9.99□□□□□ -0.81
COMMD9-207ENST00000533308 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 INTS3Q68E01 1043 aaKnown RBP9.99□□□□□ -0.81
COMMD9-207ENST00000533308 PPP1R42Q7Z4L9 355 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 FTSJ3Q8IY81 847 aaKnown RBP9.99□□□□□ -0.81
COMMD9-207ENST00000533308 ZBTB38Q8NAP3 1195 aaPredicted RBP9.99□□□□□ -0.81
COMMD9-207ENST00000533308 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 SH3TC1Q8TE82 1336 aa9.99□□□□□ -0.81
COMMD9-207ENST00000533308 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 H7C1W4 665 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
COMMD9-207ENST00000533308 PCCAP05165 728 aaPredicted RBP9.98□□□□□ -0.81
COMMD9-207ENST00000533308 CCT4P50991 539 aaKnown RBP9.98□□□□□ -0.81
COMMD9-207ENST00000533308 ST5P78524 1137 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 ITPRIPQ8IWB1 547 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 SUCLG2Q96I99 432 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 CCDC85AQ96PX6 553 aaPredicted RBP9.98□□□□□ -0.81
COMMD9-207ENST00000533308 NYXQ9GZU5 481 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 USP44Q9H0E7 712 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 SLX4Q8IY92 1834 aa9.98□□□□□ -0.81
COMMD9-207ENST00000533308 DPEP1P16444 411 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
COMMD9-207ENST00000533308 IRX6P78412 446 aaPredicted RBP9.97□□□□□ -0.81
COMMD9-207ENST00000533308 TPTE2Q6XPS3 522 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 KAZALD1Q96I82 304 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 C9orf78Q9NZ63 289 aaPredicted RBP9.97□□□□□ -0.81
COMMD9-207ENST00000533308 UTYO14607 1347 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 CDHR2Q9BYE9 1310 aa9.97□□□□□ -0.81
COMMD9-207ENST00000533308 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
COMMD9-207ENST00000533308 A0A0G2JLW4 131 aa9.96□□□□□ -0.82
COMMD9-207ENST00000533308 KCNA3P22001 575 aa9.96□□□□□ -0.82
COMMD9-207ENST00000533308 MVPQ14764 893 aaKnown RBP9.96□□□□□ -0.82
COMMD9-207ENST00000533308 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
COMMD9-207ENST00000533308 BRIP1Q9BX63 1249 aa9.96□□□□□ -0.82
COMMD9-207ENST00000533308 LRRFIP2Q9Y608 721 aaKnown RBP9.96□□□□□ -0.82
COMMD9-207ENST00000533308 ARFGEF1Q9Y6D6 1849 aa9.96□□□□□ -0.82
COMMD9-207ENST00000533308 CTSWP56202 376 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 FOXO4P98177 505 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 SLC10A5Q5PT55 438 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 C2CD5Q86YS7 1000 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 ANKRD44Q8N8A2 993 aa9.95□□□□□ -0.82
COMMD9-207ENST00000533308 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-207ENST00000533308 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms