RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
HIF3A-215ENST00000533145 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-215ENST00000533145 C9orf78Q9NZ63 289 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-215ENST00000533145 SRP68Q9UHB9 627 aaKnown RBP17.72■□□□□ 0.43
HIF3A-215ENST00000533145 NBPF7P0C2Y1 421 aaPredicted RBP17.71■□□□□ 0.43
HIF3A-215ENST00000533145 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
HIF3A-215ENST00000533145 CASP7P55210 303 aa17.71■□□□□ 0.43
HIF3A-215ENST00000533145 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
HIF3A-215ENST00000533145 PNPLA7Q6ZV29 1317 aa17.71■□□□□ 0.42
HIF3A-215ENST00000533145 GNAI2P04899 355 aa17.7■□□□□ 0.42
HIF3A-215ENST00000533145 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
HIF3A-215ENST00000533145 GYS1P13807 737 aa17.7■□□□□ 0.42
HIF3A-215ENST00000533145 UBN2Q6ZU65 1347 aa17.7■□□□□ 0.42
HIF3A-215ENST00000533145 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
HIF3A-215ENST00000533145 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-215ENST00000533145 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-215ENST00000533145 NIP7Q9Y221 180 aaKnown RBP eCLIP17.69■□□□□ 0.42
HIF3A-215ENST00000533145 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
HIF3A-215ENST00000533145 GPTP24298 496 aa17.68■□□□□ 0.42
HIF3A-215ENST00000533145 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
HIF3A-215ENST00000533145 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
HIF3A-215ENST00000533145 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
HIF3A-215ENST00000533145 TM4SF1P30408 202 aa17.67■□□□□ 0.42
HIF3A-215ENST00000533145 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
HIF3A-215ENST00000533145 SETDB2Q96T68 719 aa17.67■□□□□ 0.42
HIF3A-215ENST00000533145 PLA2G12BQ9BX93 195 aa17.67■□□□□ 0.42
HIF3A-215ENST00000533145 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
HIF3A-215ENST00000533145 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
HIF3A-215ENST00000533145 ANKRD44Q8N8A2 993 aa17.66■□□□□ 0.42
HIF3A-215ENST00000533145 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
HIF3A-215ENST00000533145 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
HIF3A-215ENST00000533145 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
HIF3A-215ENST00000533145 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
HIF3A-215ENST00000533145 MYH3P11055 1940 aa17.65■□□□□ 0.42
HIF3A-215ENST00000533145 NTSR2O95665 410 aa17.65■□□□□ 0.42
HIF3A-215ENST00000533145 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
HIF3A-215ENST00000533145 MTX1Q13505 466 aa17.65■□□□□ 0.42
HIF3A-215ENST00000533145 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
HIF3A-215ENST00000533145 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
HIF3A-215ENST00000533145 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
HIF3A-215ENST00000533145 NFIXQ14938 502 aa17.64■□□□□ 0.41
HIF3A-215ENST00000533145 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
HIF3A-215ENST00000533145 SLC16A10Q8TF71 515 aa17.64■□□□□ 0.41
HIF3A-215ENST00000533145 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
HIF3A-215ENST00000533145 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
HIF3A-215ENST00000533145 LAMB2P55268 1798 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
HIF3A-215ENST00000533145 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-215ENST00000533145 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 FAM89AQ96GI7 184 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 RWDD1Q9H446 243 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-215ENST00000533145 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 CARMIL3Q8ND23 1372 aa17.63■□□□□ 0.41
HIF3A-215ENST00000533145 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
HIF3A-215ENST00000533145 MSH5O43196 834 aa17.62■□□□□ 0.41
HIF3A-215ENST00000533145 FOXO4P98177 505 aa17.62■□□□□ 0.41
HIF3A-215ENST00000533145 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
HIF3A-215ENST00000533145 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
HIF3A-215ENST00000533145 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
HIF3A-215ENST00000533145 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
HIF3A-215ENST00000533145 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
HIF3A-215ENST00000533145 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
HIF3A-215ENST00000533145 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
HIF3A-215ENST00000533145 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-215ENST00000533145 IRS4O14654 1257 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-215ENST00000533145 PDE8AO60658 829 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 HMMRO75330 724 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 IGHDP01880 384 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 CSF1RP07333 972 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 POLA2Q14181 598 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
HIF3A-215ENST00000533145 CASZ1Q86V15 1759 aa17.59■□□□□ 0.41
HIF3A-215ENST00000533145 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
HIF3A-215ENST00000533145 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
HIF3A-215ENST00000533145 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-215ENST00000533145 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-215ENST00000533145 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
HIF3A-215ENST00000533145 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
HIF3A-215ENST00000533145 SERPINB2P05120 415 aa17.58■□□□□ 0.4
HIF3A-215ENST00000533145 FAM177BA6PVY3 158 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 DDR1Q08345 913 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-215ENST00000533145 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 TTLL11Q8NHH1 800 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
HIF3A-215ENST00000533145 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
HIF3A-215ENST00000533145 GTF2E1P29083 439 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-215ENST00000533145 CTSWP56202 376 aa17.56■□□□□ 0.4
HIF3A-215ENST00000533145 SMC5Q8IY18 1101 aa17.56■□□□□ 0.4
HIF3A-215ENST00000533145 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-215ENST00000533145 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-215ENST00000533145 SF3B3Q15393 1217 aaKnown RBP17.55■□□□□ 0.4
HIF3A-215ENST00000533145 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
HIF3A-215ENST00000533145 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
HIF3A-215ENST00000533145 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
HIF3A-215ENST00000533145 PDGFDQ9GZP0 370 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms