RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
SMPD1-208ENST00000533123 ZNF652Q9Y2D9 606 aa23.1■■□□□ 1.29
SMPD1-208ENST00000533123 LRRFIP2Q9Y608 721 aaKnown RBP23.1■■□□□ 1.29
SMPD1-208ENST00000533123 PDE4AP27815 886 aa23.09■■□□□ 1.29
SMPD1-208ENST00000533123 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
SMPD1-208ENST00000533123 ZNF34Q8IZ26 560 aa23.09■■□□□ 1.29
SMPD1-208ENST00000533123 CLEC4GQ6UXB4 293 aa23.09■■□□□ 1.29
SMPD1-208ENST00000533123 NLRP10Q86W26 655 aa23.09■■□□□ 1.29
SMPD1-208ENST00000533123 USP42Q9H9J4 1324 aaKnown RBP23.09■■□□□ 1.29
SMPD1-208ENST00000533123 BCORQ6W2J9 1755 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 C4AP0C0L4 1744 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 UTYO14607 1347 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 UBE3BQ7Z3V4 1068 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 SIRT2Q8IXJ6 389 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 BCL11AQ9H165 835 aa23.08■■□□□ 1.29
SMPD1-208ENST00000533123 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
SMPD1-208ENST00000533123 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.28
SMPD1-208ENST00000533123 IBTKQ9P2D0 1353 aaPredicted RBP23.07■■□□□ 1.28
SMPD1-208ENST00000533123 ANKRD36CQ5JPF3 1778 aa23.07■■□□□ 1.28
SMPD1-208ENST00000533123 BICDL1Q6ZP65 573 aa23.06■■□□□ 1.28
SMPD1-208ENST00000533123 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
SMPD1-208ENST00000533123 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMPD1-208ENST00000533123 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
SMPD1-208ENST00000533123 H7C1W4 665 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 TBC1D9BQ66K14 1250 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 CEP85Q6P2H3 762 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 SCN7AQ01118 1682 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 FAM177BA6PVY3 158 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 SLC15A2Q16348 729 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 COL23A1Q86Y22 540 aaPredicted RBP23.05■■□□□ 1.28
SMPD1-208ENST00000533123 FAM89AQ96GI7 184 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 SUCLG2Q96I99 432 aa23.05■■□□□ 1.28
SMPD1-208ENST00000533123 CASP7P55210 303 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 KAZALD1Q96I82 304 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 RGL2O15211 777 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 SUSD4Q5VX71 490 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 STK32BQ9NY57 414 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 TUBGCP6Q96RT7 1819 aa23.04■■□□□ 1.28
SMPD1-208ENST00000533123 SYNE4Q8N205 404 aa23.03■■□□□ 1.28
SMPD1-208ENST00000533123 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
SMPD1-208ENST00000533123 PNPLA7Q6ZV29 1317 aa23.03■■□□□ 1.28
SMPD1-208ENST00000533123 RPAP2Q8IXW5 612 aaPredicted RBP23.02■■□□□ 1.28
SMPD1-208ENST00000533123 ANKRD44Q8N8A2 993 aa23.02■■□□□ 1.28
SMPD1-208ENST00000533123 ZBTB38Q8NAP3 1195 aaPredicted RBP23.02■■□□□ 1.28
SMPD1-208ENST00000533123 GYS1P13807 737 aa23.02■■□□□ 1.28
SMPD1-208ENST00000533123 PCCAP05165 728 aaPredicted RBP23.01■■□□□ 1.27
SMPD1-208ENST00000533123 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
SMPD1-208ENST00000533123 FLAD1Q8NFF5 587 aa23.01■■□□□ 1.27
SMPD1-208ENST00000533123 BICC1Q9H694 974 aaKnown RBP23.01■■□□□ 1.27
SMPD1-208ENST00000533123 HDAC5Q9UQL6 1122 aa23.01■■□□□ 1.27
SMPD1-208ENST00000533123 EPHA10Q5JZY3 1008 aa23.01■■□□□ 1.27
SMPD1-208ENST00000533123 ILDR2Q71H61 639 aa23■■□□□ 1.27
SMPD1-208ENST00000533123 SETDB2Q96T68 719 aa23■■□□□ 1.27
SMPD1-208ENST00000533123 PNMA6EA0A0J9YXQ4 647 aa23■■□□□ 1.27
SMPD1-208ENST00000533123 UTP14AQ9BVJ6 771 aaKnown RBP23■■□□□ 1.27
SMPD1-208ENST00000533123 ATP8B2P98198 1209 aa22.99■■□□□ 1.27
SMPD1-208ENST00000533123 C8orf34Q49A92 452 aa22.99■■□□□ 1.27
SMPD1-208ENST00000533123 PPP1R42Q7Z4L9 355 aa22.98■■□□□ 1.27
SMPD1-208ENST00000533123 NFIXQ14938 502 aa22.98■■□□□ 1.27
SMPD1-208ENST00000533123 NTSR2O95665 410 aa22.97■■□□□ 1.27
SMPD1-208ENST00000533123 NUCB1Q02818 461 aa22.97■■□□□ 1.27
SMPD1-208ENST00000533123 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
SMPD1-208ENST00000533123 NUTM1Q86Y26 1132 aa22.97■■□□□ 1.27
SMPD1-208ENST00000533123 SRGAP3O43295 1099 aa22.96■■□□□ 1.27
SMPD1-208ENST00000533123 GCC1Q96CN9 775 aa22.96■■□□□ 1.27
SMPD1-208ENST00000533123 SH3TC1Q8TE82 1336 aa22.96■■□□□ 1.27
SMPD1-208ENST00000533123 IRS4O14654 1257 aaPredicted RBP22.96■■□□□ 1.27
SMPD1-208ENST00000533123 FOXO4P98177 505 aa22.96■■□□□ 1.27
SMPD1-208ENST00000533123 LNPKQ9C0E8 428 aa22.96■■□□□ 1.27
SMPD1-208ENST00000533123 CDHR2Q9BYE9 1310 aa22.95■■□□□ 1.26
SMPD1-208ENST00000533123 HMMRO75330 724 aa22.94■■□□□ 1.26
SMPD1-208ENST00000533123 MTX1Q13505 466 aa22.94■■□□□ 1.26
SMPD1-208ENST00000533123 NBPF5PQ86XG9 351 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-208ENST00000533123 HCLS1P14317 486 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-208ENST00000533123 ANKRD45Q5TZF3 282 aa22.94■■□□□ 1.26
SMPD1-208ENST00000533123 LMBR1LQ6UX01 489 aa22.94■■□□□ 1.26
SMPD1-208ENST00000533123 CHD1LQ86WJ1 897 aa22.94■■□□□ 1.26
SMPD1-208ENST00000533123 PDGFDQ9GZP0 370 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-208ENST00000533123 RABL6Q3YEC7 729 aaPredicted RBP22.93■■□□□ 1.26
SMPD1-208ENST00000533123 GTF2E1P29083 439 aaPredicted RBP22.93■■□□□ 1.26
SMPD1-208ENST00000533123 TM4SF1P30408 202 aa22.93■■□□□ 1.26
SMPD1-208ENST00000533123 ERFEQ4G0M1 354 aa22.93■■□□□ 1.26
SMPD1-208ENST00000533123 SSH3Q8TE77 659 aa22.93■■□□□ 1.26
SMPD1-208ENST00000533123 CARMIL3Q8ND23 1372 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 PLA2G12BQ9BX93 195 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 CHMP3Q9Y3E7 222 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 POLA2Q14181 598 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 MSL1Q68DK7 614 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 TPTE2Q6XPS3 522 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 NYXQ9GZU5 481 aa22.92■■□□□ 1.26
SMPD1-208ENST00000533123 CCDC24Q8N4L8 307 aa22.91■■□□□ 1.26
SMPD1-208ENST00000533123 CCDC85AQ96PX6 553 aaPredicted RBP22.91■■□□□ 1.26
SMPD1-208ENST00000533123 DCTPP1Q9H773 170 aa22.91■■□□□ 1.26
SMPD1-208ENST00000533123 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
SMPD1-208ENST00000533123 PDE8AO60658 829 aa22.9■■□□□ 1.26
SMPD1-208ENST00000533123 DDR1Q08345 913 aa22.9■■□□□ 1.26
SMPD1-208ENST00000533123 NPHP1O15259 732 aa22.89■■□□□ 1.26
SMPD1-208ENST00000533123 QSER1Q2KHR3 1735 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms