RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TSR2Q969E8 191 aaKnown RBP39.19■■■■□ 3.86
SSSCA1-207ENST00000533115 FER1L6Q2WGJ9 1857 aa39.19■■■■□ 3.86
SSSCA1-207ENST00000533115 IL16Q14005 1332 aa39.18■■■■□ 3.86
SSSCA1-207ENST00000533115 ALDH1B1P30837 517 aa39.18■■■■□ 3.86
SSSCA1-207ENST00000533115 C7orf43Q8WVR3 580 aa39.18■■■■□ 3.86
SSSCA1-207ENST00000533115 NLRP10Q86W26 655 aa39.17■■■■□ 3.86
SSSCA1-207ENST00000533115 CHMP4AQ9BY43 222 aa39.16■■■■□ 3.86
SSSCA1-207ENST00000533115 RNF123Q5XPI4 1314 aa39.15■■■■□ 3.86
SSSCA1-207ENST00000533115 ZC3H4Q9UPT8 1303 aaKnown RBP39.15■■■■□ 3.86
SSSCA1-207ENST00000533115 SALL2Q9Y467 1007 aaPredicted RBP39.15■■■■□ 3.86
SSSCA1-207ENST00000533115 LTBP3Q9NS15 1303 aa39.14■■■■□ 3.86
SSSCA1-207ENST00000533115 CCDC88AQ3V6T2 1871 aa39.14■■■■□ 3.86
SSSCA1-207ENST00000533115 TSPYL6Q8N831 410 aa39.14■■■■□ 3.86
SSSCA1-207ENST00000533115 TAOK3Q9H2K8 898 aa39.14■■■■□ 3.86
SSSCA1-207ENST00000533115 KIF3CO14782 793 aa39.13■■■■□ 3.85
SSSCA1-207ENST00000533115 SLC10A5Q5PT55 438 aa39.13■■■■□ 3.85
SSSCA1-207ENST00000533115 RPGRQ92834 1020 aaKnown RBP39.13■■■■□ 3.85
SSSCA1-207ENST00000533115 CCDC93Q567U6 631 aa39.12■■■■□ 3.85
SSSCA1-207ENST00000533115 CCDC30Q5VVM6 783 aa39.12■■■■□ 3.85
SSSCA1-207ENST00000533115 HOXA10P31260 410 aaPredicted RBP39.11■■■■□ 3.85
SSSCA1-207ENST00000533115 NLRP3Q96P20 1036 aa39.11■■■■□ 3.85
SSSCA1-207ENST00000533115 PHAXQ9H814 394 aaKnown RBP39.11■■■■□ 3.85
SSSCA1-207ENST00000533115 C3orf67Q6ZVT6 689 aa39.1■■■■□ 3.85
SSSCA1-207ENST00000533115 WDR63Q8IWG1 891 aa39.1■■■■□ 3.85
SSSCA1-207ENST00000533115 TRMT112Q9UI30 125 aaKnown RBP39.1■■■■□ 3.85
SSSCA1-207ENST00000533115 KDM2BQ8NHM5 1336 aa39.1■■■■□ 3.85
SSSCA1-207ENST00000533115 NMRK2Q9NPI5 230 aa39.09■■■■□ 3.85
SSSCA1-207ENST00000533115 GOLGA2Q08379 1002 aa39.08■■■■□ 3.85
SSSCA1-207ENST00000533115 RBM17Q96I25 401 aaKnown RBP39.08■■■■□ 3.85
SSSCA1-207ENST00000533115 ISCA1Q9BUE6 129 aa39.08■■■■□ 3.85
SSSCA1-207ENST00000533115 TIAM2Q8IVF5 1701 aa39.06■■■■□ 3.84
SSSCA1-207ENST00000533115 OLFM4Q6UX06 510 aa39.06■■■■□ 3.84
SSSCA1-207ENST00000533115 RIC3Q7Z5B4 369 aa39.06■■■■□ 3.84
SSSCA1-207ENST00000533115 CRAMP1Q96RY5 1269 aa39.06■■■■□ 3.84
SSSCA1-207ENST00000533115 SH3TC1Q8TE82 1336 aa39.06■■■■□ 3.84
SSSCA1-207ENST00000533115 TWISTNBQ3B726 338 aaPredicted RBP39.05■■■■□ 3.84
SSSCA1-207ENST00000533115 SYNE4Q8N205 404 aa39.05■■■■□ 3.84
SSSCA1-207ENST00000533115 ATP5J2-PTCD1G3V325 749 aa39.04■■■■□ 3.84
SSSCA1-207ENST00000533115 RTKN2Q8IZC4 609 aa39.04■■■■□ 3.84
SSSCA1-207ENST00000533115 DICER1Q9UPY3 1922 aaKnown RBP39.03■■■■□ 3.84
SSSCA1-207ENST00000533115 HCLS1P14317 486 aaPredicted RBP39.03■■■■□ 3.84
SSSCA1-207ENST00000533115 FANCIQ9NVI1 1328 aa39.03■■■■□ 3.84
SSSCA1-207ENST00000533115 FKBP4Q02790 459 aaKnown RBP eCLIP39.02■■■■□ 3.84
SSSCA1-207ENST00000533115 ZNF428Q96B54 188 aa39.02■■■■□ 3.84
SSSCA1-207ENST00000533115 GLTPD2A6NH11 291 aa39.01■■■■□ 3.84
SSSCA1-207ENST00000533115 TRIM28Q13263 835 aaKnown RBP39.01■■■■□ 3.84
SSSCA1-207ENST00000533115 STK31Q9BXU1 1019 aa39■■■■□ 3.83
SSSCA1-207ENST00000533115 DDX58O95786 925 aaKnown RBP38.98■■■■□ 3.83
SSSCA1-207ENST00000533115 CC2D2BQ6DHV5 1058 aa38.98■■■■□ 3.83
SSSCA1-207ENST00000533115 RRAGCQ9HB90 399 aa38.98■■■■□ 3.83
SSSCA1-207ENST00000533115 PPEF1O14829 653 aaPredicted RBP38.97■■■■□ 3.83
SSSCA1-207ENST00000533115 LAMB2P55268 1798 aa38.97■■■■□ 3.83
SSSCA1-207ENST00000533115 TCERG1O14776 1098 aaKnown RBP38.96■■■■□ 3.83
SSSCA1-207ENST00000533115 TOMM70O94826 608 aa38.96■■■■□ 3.83
SSSCA1-207ENST00000533115 FAM89AQ96GI7 184 aa38.96■■■■□ 3.83
SSSCA1-207ENST00000533115 SNED1Q8TER0 1413 aa38.96■■■■□ 3.83
SSSCA1-207ENST00000533115 DPY19L2Q6NUT2 758 aa38.95■■■■□ 3.83
SSSCA1-207ENST00000533115 MYD88Q99836 296 aa38.95■■■■□ 3.83
SSSCA1-207ENST00000533115 ZNF277Q9NRM2 450 aaPredicted RBP38.95■■■■□ 3.83
SSSCA1-207ENST00000533115 ABCC4O15439 1325 aa38.94■■■■□ 3.82
SSSCA1-207ENST00000533115 SPINK5Q9NQ38 1064 aaPredicted RBP38.94■■■■□ 3.82
SSSCA1-207ENST00000533115 GRIPAP1Q4V328 841 aa38.93■■■■□ 3.82
SSSCA1-207ENST00000533115 PSMD1Q99460 953 aa38.93■■■■□ 3.82
SSSCA1-207ENST00000533115 C16orf71Q8IYS4 520 aaPredicted RBP38.92■■■■□ 3.82
SSSCA1-207ENST00000533115 METTL22Q9BUU2 404 aaPredicted RBP38.92■■■■□ 3.82
SSSCA1-207ENST00000533115 DDX60Q8IY21 1712 aaKnown RBP38.92■■■■□ 3.82
SSSCA1-207ENST00000533115 EXOSC9Q06265 439 aaKnown RBP38.91■■■■□ 3.82
SSSCA1-207ENST00000533115 SLC4A2P04920 1241 aa38.9■■■■□ 3.82
SSSCA1-207ENST00000533115 KSR2Q6VAB6 950 aa38.9■■■■□ 3.82
SSSCA1-207ENST00000533115 DDX46Q7L014 1031 aaKnown RBP38.9■■■■□ 3.82
SSSCA1-207ENST00000533115 MYH16Q9H6N6 1097 aa38.9■■■■□ 3.82
SSSCA1-207ENST00000533115 MAP3K2Q9Y2U5 619 aa38.9■■■■□ 3.82
SSSCA1-207ENST00000533115 VAMP4O75379 141 aa38.89■■■■□ 3.82
SSSCA1-207ENST00000533115 RTL5Q5HYW3 569 aaPredicted RBP38.89■■■■□ 3.82
SSSCA1-207ENST00000533115 CCDC191Q8NCU4 936 aa38.89■■■■□ 3.82
SSSCA1-207ENST00000533115 BBOX1O75936 387 aa38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 IARSP41252 1262 aaKnown RBP38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 SLC51AQ86UW1 340 aa38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 ZBTB38Q8NAP3 1195 aaPredicted RBP38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 TMX4Q9H1E5 349 aaPredicted RBP38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 ATP6V0A2Q9Y487 856 aa38.88■■■■□ 3.81
SSSCA1-207ENST00000533115 PI4KAP2A4QPH2 592 aa38.87■■■■□ 3.81
SSSCA1-207ENST00000533115 IRS4O14654 1257 aaPredicted RBP38.87■■■■□ 3.81
SSSCA1-207ENST00000533115 G2E3Q7L622 706 aa38.87■■■■□ 3.81
SSSCA1-207ENST00000533115 PI4KAP1Q8N8J0 262 aa38.87■■■■□ 3.81
SSSCA1-207ENST00000533115 VEGFAP15692 232 aaPredicted RBP38.86■■■■□ 3.81
SSSCA1-207ENST00000533115 RBM46Q8TBY0 533 aaKnown RBP38.86■■■■□ 3.81
SSSCA1-207ENST00000533115 CWC25Q9NXE8 425 aaPredicted RBP38.86■■■■□ 3.81
SSSCA1-207ENST00000533115 GRAPQ13588 217 aa38.85■■■■□ 3.81
SSSCA1-207ENST00000533115 SF3B3Q15393 1217 aaKnown RBP38.85■■■■□ 3.81
SSSCA1-207ENST00000533115 GRAPLQ8TC17 118 aaPredicted RBP38.85■■■■□ 3.81
SSSCA1-207ENST00000533115 ZNF521Q96K83 1311 aa38.85■■■■□ 3.81
SSSCA1-207ENST00000533115 WDR90Q96KV7 1748 aa38.84■■■■□ 3.81
SSSCA1-207ENST00000533115 PCCAP05165 728 aaPredicted RBP38.82■■■■□ 3.8
SSSCA1-207ENST00000533115 HSPA6P17066 643 aa38.82■■■■□ 3.8
SSSCA1-207ENST00000533115 SP8Q8IXZ3 490 aa38.82■■■■□ 3.8
SSSCA1-207ENST00000533115 POTECB2RU33 542 aa38.81■■■■□ 3.8
SSSCA1-207ENST00000533115 CCER2I3L3R5 266 aa38.81■■■■□ 3.8
SSSCA1-207ENST00000533115 DDNO94850 711 aaPredicted RBP38.81■■■■□ 3.8
SSSCA1-207ENST00000533115 HSP90B1P14625 803 aaKnown RBP38.81■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms