RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PHAXQ9H814 394 aaKnown RBP19.82■□□□□ 0.76
CPSF1-210ENST00000532935 NLRP10Q86W26 655 aa19.81■□□□□ 0.76
CPSF1-210ENST00000532935 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
CPSF1-210ENST00000532935 C21orf2O43822 256 aa19.8■□□□□ 0.76
CPSF1-210ENST00000532935 GOLGA2Q08379 1002 aa19.8■□□□□ 0.76
CPSF1-210ENST00000532935 PRPF40BQ6NWY9 871 aaKnown RBP19.8■□□□□ 0.76
CPSF1-210ENST00000532935 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
CPSF1-210ENST00000532935 ZNF521Q96K83 1311 aa19.79■□□□□ 0.76
CPSF1-210ENST00000532935 DICER1Q9UPY3 1922 aaKnown RBP19.79■□□□□ 0.76
CPSF1-210ENST00000532935 CRY2Q49AN0 593 aa19.79■□□□□ 0.76
CPSF1-210ENST00000532935 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
CPSF1-210ENST00000532935 ZNF219Q9P2Y4 722 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-210ENST00000532935 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
CPSF1-210ENST00000532935 RASSF7Q02833 373 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 EXOSC9Q06265 439 aaKnown RBP19.78■□□□□ 0.76
CPSF1-210ENST00000532935 C9orf131Q5VYM1 1079 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 RIC3Q7Z5B4 369 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 ISCA1Q9BUE6 129 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
CPSF1-210ENST00000532935 TIAM2Q8IVF5 1701 aa19.77■□□□□ 0.76
CPSF1-210ENST00000532935 TCERG1O14776 1098 aaKnown RBP19.77■□□□□ 0.76
CPSF1-210ENST00000532935 SLC10A5Q5PT55 438 aa19.77■□□□□ 0.76
CPSF1-210ENST00000532935 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
CPSF1-210ENST00000532935 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
CPSF1-210ENST00000532935 NFKBIEO00221 500 aa19.76■□□□□ 0.75
CPSF1-210ENST00000532935 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
CPSF1-210ENST00000532935 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
CPSF1-210ENST00000532935 RNF181Q9P0P0 153 aa19.76■□□□□ 0.75
CPSF1-210ENST00000532935 VAMP4O75379 141 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
CPSF1-210ENST00000532935 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 C3orf67Q6ZVT6 689 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 C7orf43Q8WVR3 580 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 RPGRQ92834 1020 aaKnown RBP19.75■□□□□ 0.75
CPSF1-210ENST00000532935 ZNF428Q96B54 188 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 SH3TC1Q8TE82 1336 aa19.75■□□□□ 0.75
CPSF1-210ENST00000532935 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
CPSF1-210ENST00000532935 LMNB1P20700 586 aa19.74■□□□□ 0.75
CPSF1-210ENST00000532935 HOXA10P31260 410 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-210ENST00000532935 PRELPP51888 382 aa19.74■□□□□ 0.75
CPSF1-210ENST00000532935 ZNF526Q8TF50 670 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-210ENST00000532935 TAF1P21675 1872 aa19.73■□□□□ 0.75
CPSF1-210ENST00000532935 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
CPSF1-210ENST00000532935 MYD88Q99836 296 aa19.73■□□□□ 0.75
CPSF1-210ENST00000532935 CCDC93Q567U6 631 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 G2E3Q7L622 706 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 MIER1Q8N108 512 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 RBM17Q96I25 401 aaKnown RBP19.72■□□□□ 0.75
CPSF1-210ENST00000532935 CRAMP1Q96RY5 1269 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-210ENST00000532935 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-210ENST00000532935 MAP3K2Q9Y2U5 619 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
CPSF1-210ENST00000532935 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
CPSF1-210ENST00000532935 FAM89AQ96GI7 184 aa19.71■□□□□ 0.75
CPSF1-210ENST00000532935 TAOK3Q9H2K8 898 aa19.71■□□□□ 0.75
CPSF1-210ENST00000532935 PI4KAP2A4QPH2 592 aa19.7■□□□□ 0.74
CPSF1-210ENST00000532935 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
CPSF1-210ENST00000532935 PI4KAP1Q8N8J0 262 aa19.7■□□□□ 0.74
CPSF1-210ENST00000532935 E9PSI1 815 aa19.69■□□□□ 0.74
CPSF1-210ENST00000532935 FLIIQ13045 1269 aa19.69■□□□□ 0.74
CPSF1-210ENST00000532935 CCDC191Q8NCU4 936 aa19.69■□□□□ 0.74
CPSF1-210ENST00000532935 ZC3H4Q9UPT8 1303 aaKnown RBP19.69■□□□□ 0.74
CPSF1-210ENST00000532935 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-210ENST00000532935 RTKN2Q8IZC4 609 aa19.68■□□□□ 0.74
CPSF1-210ENST00000532935 ZBTB38Q8NAP3 1195 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-210ENST00000532935 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-210ENST00000532935 ABCC4O15439 1325 aa19.68■□□□□ 0.74
CPSF1-210ENST00000532935 MYH3P11055 1940 aa19.68■□□□□ 0.74
CPSF1-210ENST00000532935 IRS4O14654 1257 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-210ENST00000532935 PPEF1O14829 653 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-210ENST00000532935 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
CPSF1-210ENST00000532935 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
CPSF1-210ENST00000532935 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
CPSF1-210ENST00000532935 SLFN5Q08AF3 891 aa19.66■□□□□ 0.74
CPSF1-210ENST00000532935 NEXNQ0ZGT2 675 aa19.66■□□□□ 0.74
CPSF1-210ENST00000532935 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-210ENST00000532935 CC2D2BQ6DHV5 1058 aa19.66■□□□□ 0.74
CPSF1-210ENST00000532935 DDX46Q7L014 1031 aaKnown RBP19.66■□□□□ 0.74
CPSF1-210ENST00000532935 PCCAP05165 728 aaPredicted RBP19.65■□□□□ 0.74
CPSF1-210ENST00000532935 SF3B3Q15393 1217 aaKnown RBP19.64■□□□□ 0.73
CPSF1-210ENST00000532935 CDCA7LQ96GN5 454 aa19.64■□□□□ 0.73
CPSF1-210ENST00000532935 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
CPSF1-210ENST00000532935 LRRC37AA6NMS7 1700 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
CPSF1-210ENST00000532935 GRAPQ13588 217 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 CWF19L2Q2TBE0 894 aaKnown RBP19.63■□□□□ 0.73
CPSF1-210ENST00000532935 GRIPAP1Q4V328 841 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 SLC51AQ86UW1 340 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 GRAPLQ8TC17 118 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-210ENST00000532935 DNAAF4Q8WXU2 420 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-210ENST00000532935 PSMD1Q99460 953 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 ZNF277Q9NRM2 450 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-210ENST00000532935 ATP6V0A2Q9Y487 856 aa19.63■□□□□ 0.73
CPSF1-210ENST00000532935 NEURL1BA8MQ27 555 aa19.62■□□□□ 0.73
CPSF1-210ENST00000532935 KIF3CO14782 793 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms