RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 MED23Q9ULK4 1368 aa10□□□□□ -0.81
TRIM53BP-201ENST00000532912 LARGE1O95461 756 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 DCAF5Q96JK2 942 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 USP16Q9Y5T5 823 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 AFDNP55196 1824 aaKnown RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 TCHHQ07283 1943 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 UBR2Q8IWV8 1755 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 SPATA31A3Q5VYP0 1347 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 SNRPA1P09661 255 aaKnown RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 MYL6BP14649 208 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 CPA1P15085 419 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 CASP7P55210 303 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 MAP4K1Q92918 833 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 FAM227BQ96M60 508 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 MYD88Q99836 296 aa9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 CCDC8Q9H0W5 538 aaPredicted RBP9.99□□□□□ -0.81
TRIM53BP-201ENST00000532912 XIRP1Q702N8 1843 aaKnown RBP9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 HIP1O00291 1037 aa9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 ATF3P18847 181 aa9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 NMIQ13287 307 aaPredicted RBP9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 PRPF40BQ6NWY9 871 aaKnown RBP9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 KLHDC4Q8TBB5 520 aa9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 NUP188Q5SRE5 1749 aa9.98□□□□□ -0.81
TRIM53BP-201ENST00000532912 PAPPAQ13219 1627 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 A0A0D9SFI3 127 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 SYCE3A1L190 88 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 GADD45BO75293 160 aaPredicted RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 ZSCAN22P10073 491 aaPredicted RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 SYT1P21579 422 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 COL9A3Q14050 684 aaPredicted RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 CREB3L3Q68CJ9 461 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 CABLES1Q8TDN4 633 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 RBM8AQ9Y5S9 174 aaKnown RBP9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 TJP1Q07157 1748 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 RFX7Q2KHR2 1363 aa9.97□□□□□ -0.81
TRIM53BP-201ENST00000532912 STX6O43752 255 aa9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 CHRNA2Q15822 529 aa9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 USP48Q86UV5 1035 aa9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 TRIM44Q96DX7 344 aaPredicted RBP9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 JAKMIP1Q96N16 626 aaKnown RBP9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 SIL1Q9H173 461 aa9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 SH2B1Q9NRF2 756 aaPredicted RBP9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.81
TRIM53BP-201ENST00000532912 SLC27A2O14975 620 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 F13A1P00488 732 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 HS1BP3Q53T59 392 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 ZSCAN31Q96LW9 406 aaPredicted RBP9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 ALDH8A1Q9H2A2 487 aaPredicted RBP9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 BOLA2Q9H3K6 86 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 DBNLQ9UJU6 430 aaKnown RBP9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
TRIM53BP-201ENST00000532912 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 ATP5JP18859 108 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 PIP4K2AP48426 406 aaPredicted RBP9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 ME3Q16798 604 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 ZNF589Q86UQ0 364 aaPredicted RBP9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 MTMR6Q9Y217 621 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 FPGT-TNNI3KV9GXZ4 949 aa9.95□□□□□ -0.82
TRIM53BP-201ENST00000532912 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 NBPF14Q5TI25 921 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 USPL1Q5W0Q7 1092 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 CCDC83Q8IWF9 413 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 PLBD2Q8NHP8 589 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 SMC3Q9UQE7 1217 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 CNPY2Q9Y2B0 182 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 TAF6LQ9Y6J9 622 aa9.94□□□□□ -0.82
TRIM53BP-201ENST00000532912 TAF5LO75529 589 aa9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 ZKSCAN1P17029 563 aaPredicted RBP9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 GJB2P29033 226 aa9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 TFCP2Q12800 502 aa9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 EDC3Q96F86 508 aaKnown RBP9.93□□□□□ -0.82
TRIM53BP-201ENST00000532912 FSD1Q9BTV5 496 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms