RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 STK3Q13188 491 aa17.89■□□□□ 0.45
SSH3-210ENST00000532881 NECTIN1Q15223 517 aa17.89■□□□□ 0.45
SSH3-210ENST00000532881 CREB3L3Q68CJ9 461 aa17.88■□□□□ 0.45
SSH3-210ENST00000532881 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
SSH3-210ENST00000532881 CCDC171Q6TFL3 1326 aa17.88■□□□□ 0.45
SSH3-210ENST00000532881 F13A1P00488 732 aa17.88■□□□□ 0.45
SSH3-210ENST00000532881 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
SSH3-210ENST00000532881 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 SEC62Q99442 399 aaKnown RBP17.87■□□□□ 0.45
SSH3-210ENST00000532881 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 HCLS1P14317 486 aaPredicted RBP17.87■□□□□ 0.45
SSH3-210ENST00000532881 GIMAP6Q6P9H5 292 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 CCDC129Q6ZRS4 1044 aa17.87■□□□□ 0.45
SSH3-210ENST00000532881 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 GCKRQ14397 625 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 GPATCH3Q96I76 525 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 MTMR6Q9Y217 621 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 SLC27A2O14975 620 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 PLCB2Q00722 1185 aa17.86■□□□□ 0.45
SSH3-210ENST00000532881 NOL7Q9UMY1 257 aaKnown RBP17.86■□□□□ 0.45
SSH3-210ENST00000532881 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
SSH3-210ENST00000532881 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
SSH3-210ENST00000532881 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
SSH3-210ENST00000532881 PPFIA3O75145 1194 aa17.85■□□□□ 0.45
SSH3-210ENST00000532881 DDX58O95786 925 aaKnown RBP17.85■□□□□ 0.45
SSH3-210ENST00000532881 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
SSH3-210ENST00000532881 PHKG2P15735 406 aa17.85■□□□□ 0.45
SSH3-210ENST00000532881 TFCP2Q12800 502 aa17.85■□□□□ 0.45
SSH3-210ENST00000532881 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
SSH3-210ENST00000532881 MAP4K1Q92918 833 aa17.84■□□□□ 0.45
SSH3-210ENST00000532881 DNAJC2Q99543 621 aaKnown RBP17.84■□□□□ 0.45
SSH3-210ENST00000532881 VPS53Q5VIR6 699 aa17.84■□□□□ 0.45
SSH3-210ENST00000532881 CDC37L1Q7L3B6 337 aa17.84■□□□□ 0.45
SSH3-210ENST00000532881 DBNLQ9UJU6 430 aaKnown RBP17.84■□□□□ 0.45
SSH3-210ENST00000532881 CYP27B1O15528 508 aa17.83■□□□□ 0.44
SSH3-210ENST00000532881 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
SSH3-210ENST00000532881 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
SSH3-210ENST00000532881 COL15A1P39059 1388 aa17.83■□□□□ 0.44
SSH3-210ENST00000532881 PTMAP06454 111 aaKnown RBP17.83■□□□□ 0.44
SSH3-210ENST00000532881 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
SSH3-210ENST00000532881 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.44
SSH3-210ENST00000532881 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
SSH3-210ENST00000532881 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
SSH3-210ENST00000532881 MEGF6O75095 1541 aa17.82■□□□□ 0.44
SSH3-210ENST00000532881 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
SSH3-210ENST00000532881 RBM10P98175 930 aaKnown RBP17.82■□□□□ 0.44
SSH3-210ENST00000532881 TFIP11Q9UBB9 837 aaKnown RBP17.82■□□□□ 0.44
SSH3-210ENST00000532881 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 OFD1O75665 1012 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 SYAP1Q96A49 352 aaPredicted RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 DBNDD2Q9BQY9 259 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 ZKSCAN5Q9Y2L8 839 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 UTYO14607 1347 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 TATP17735 454 aaPredicted RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 FOSBP53539 338 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 CAMK4Q16566 473 aa17.81■□□□□ 0.44
SSH3-210ENST00000532881 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
SSH3-210ENST00000532881 C5P01031 1676 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 LRP10Q7Z4F1 713 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 A0A087WZG4 1122 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 UBE2HP62256 183 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
SSH3-210ENST00000532881 CCDC183Q5T5S1 534 aa17.8■□□□□ 0.44
SSH3-210ENST00000532881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSH3-210ENST00000532881 SLIT3O75094 1523 aa17.79■□□□□ 0.44
SSH3-210ENST00000532881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
SSH3-210ENST00000532881 AP5Z1O43299 807 aa17.79■□□□□ 0.44
SSH3-210ENST00000532881 NCAPD2Q15021 1401 aa17.79■□□□□ 0.44
SSH3-210ENST00000532881 JAK2O60674 1132 aa17.79■□□□□ 0.44
SSH3-210ENST00000532881 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
SSH3-210ENST00000532881 TTC5Q8N0Z6 440 aa17.79■□□□□ 0.44
SSH3-210ENST00000532881 TTC12Q9H892 705 aaPredicted RBP17.79■□□□□ 0.44
SSH3-210ENST00000532881 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 TTC6Q86TZ1 520 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 TMEM87AQ8NBN3 555 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 KCNB2Q92953 911 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 TAF5LO75529 589 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
SSH3-210ENST00000532881 ADCY5O95622 1261 aa17.77■□□□□ 0.44
SSH3-210ENST00000532881 TIMM10P62072 90 aa17.77■□□□□ 0.44
SSH3-210ENST00000532881 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
SSH3-210ENST00000532881 TM6SF1Q9BZW5 370 aa17.77■□□□□ 0.44
SSH3-210ENST00000532881 LIG1P18858 919 aa17.77■□□□□ 0.43
SSH3-210ENST00000532881 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.43
SSH3-210ENST00000532881 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms