RNA–Protein interactions for RNA: ENST00000532836.5

TTC39A-217, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-217ENST00000532836 TEFQ10587 303 aa16.67■□□□□ 0.26
TTC39A-217ENST00000532836 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
TTC39A-217ENST00000532836 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
TTC39A-217ENST00000532836 VPS33BQ9H267 617 aa16.67■□□□□ 0.26
TTC39A-217ENST00000532836 GPRC5DQ9NZD1 345 aa16.67■□□□□ 0.26
TTC39A-217ENST00000532836 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
TTC39A-217ENST00000532836 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
TTC39A-217ENST00000532836 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
TTC39A-217ENST00000532836 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
TTC39A-217ENST00000532836 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
TTC39A-217ENST00000532836 NIM1KQ8IY84 436 aa16.64■□□□□ 0.25
TTC39A-217ENST00000532836 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
TTC39A-217ENST00000532836 GLIS2Q9BZE0 524 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-217ENST00000532836 PANK3Q9H999 370 aa16.63■□□□□ 0.25
TTC39A-217ENST00000532836 HMOX1P09601 288 aa16.62■□□□□ 0.25
TTC39A-217ENST00000532836 CTU1Q7Z7A3 348 aaKnown RBP16.62■□□□□ 0.25
TTC39A-217ENST00000532836 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
TTC39A-217ENST00000532836 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
TTC39A-217ENST00000532836 COL4A5P29400 1685 aa16.62■□□□□ 0.25
TTC39A-217ENST00000532836 HOXA10P31260 410 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-217ENST00000532836 HUNKP57058 714 aa16.61■□□□□ 0.25
TTC39A-217ENST00000532836 PKN2Q16513 984 aaKnown RBP16.61■□□□□ 0.25
TTC39A-217ENST00000532836 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
TTC39A-217ENST00000532836 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
TTC39A-217ENST00000532836 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
TTC39A-217ENST00000532836 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
TTC39A-217ENST00000532836 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
TTC39A-217ENST00000532836 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
TTC39A-217ENST00000532836 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
TTC39A-217ENST00000532836 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
TTC39A-217ENST00000532836 AKAP11Q9UKA4 1901 aa16.59■□□□□ 0.25
TTC39A-217ENST00000532836 RGMBQ6NW40 437 aa16.59■□□□□ 0.25
TTC39A-217ENST00000532836 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-217ENST00000532836 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
TTC39A-217ENST00000532836 TMX4Q9H1E5 349 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-217ENST00000532836 RNF186Q9NXI6 227 aa16.59■□□□□ 0.25
TTC39A-217ENST00000532836 ZNRF3Q9ULT6 936 aa16.59■□□□□ 0.25
TTC39A-217ENST00000532836 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
TTC39A-217ENST00000532836 PPIP5K2O43314 1243 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 TRPA1O75762 1119 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 CXCL9Q07325 125 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
TTC39A-217ENST00000532836 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
TTC39A-217ENST00000532836 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
TTC39A-217ENST00000532836 GMPSP49915 693 aaPredicted RBP16.57■□□□□ 0.24
TTC39A-217ENST00000532836 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
TTC39A-217ENST00000532836 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
TTC39A-217ENST00000532836 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
TTC39A-217ENST00000532836 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
TTC39A-217ENST00000532836 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
TTC39A-217ENST00000532836 TNIP1Q15025 636 aa16.56■□□□□ 0.24
TTC39A-217ENST00000532836 HABP4Q5JVS0 413 aaKnown RBP16.56■□□□□ 0.24
TTC39A-217ENST00000532836 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
TTC39A-217ENST00000532836 HPS5Q9UPZ3 1129 aa16.56■□□□□ 0.24
TTC39A-217ENST00000532836 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
TTC39A-217ENST00000532836 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
TTC39A-217ENST00000532836 HIRAP54198 1017 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-217ENST00000532836 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
TTC39A-217ENST00000532836 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
TTC39A-217ENST00000532836 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
TTC39A-217ENST00000532836 H7C1D1 291 aa16.54■□□□□ 0.24
TTC39A-217ENST00000532836 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-217ENST00000532836 ZNF157P51786 506 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-217ENST00000532836 AOC3Q16853 763 aa16.54■□□□□ 0.24
TTC39A-217ENST00000532836 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
TTC39A-217ENST00000532836 GBA2Q9HCG7 927 aaPredicted RBP16.54■□□□□ 0.24
TTC39A-217ENST00000532836 PIP4K2AP48426 406 aaPredicted RBP16.53■□□□□ 0.24
TTC39A-217ENST00000532836 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
TTC39A-217ENST00000532836 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
TTC39A-217ENST00000532836 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
TTC39A-217ENST00000532836 PER1O15534 1290 aaPredicted RBP16.52■□□□□ 0.24
TTC39A-217ENST00000532836 KCNQ3O43525 872 aa16.52■□□□□ 0.24
TTC39A-217ENST00000532836 HLFQ16534 295 aa16.52■□□□□ 0.24
TTC39A-217ENST00000532836 CSRNP1Q96S65 589 aa16.52■□□□□ 0.24
TTC39A-217ENST00000532836 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.24
TTC39A-217ENST00000532836 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
TTC39A-217ENST00000532836 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
TTC39A-217ENST00000532836 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
TTC39A-217ENST00000532836 TRPM4Q8TD43 1214 aa16.51■□□□□ 0.23
TTC39A-217ENST00000532836 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
TTC39A-217ENST00000532836 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-217ENST00000532836 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
TTC39A-217ENST00000532836 SLC10A3P09131 477 aa16.5■□□□□ 0.23
TTC39A-217ENST00000532836 KRT26Q7Z3Y9 468 aa16.5■□□□□ 0.23
TTC39A-217ENST00000532836 DPF2Q92785 391 aa16.5■□□□□ 0.23
TTC39A-217ENST00000532836 HDAC9Q9UKV0 1011 aa16.5■□□□□ 0.23
TTC39A-217ENST00000532836 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
TTC39A-217ENST00000532836 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
TTC39A-217ENST00000532836 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
TTC39A-217ENST00000532836 DCPSQ96C86 337 aaKnown RBP16.48■□□□□ 0.23
TTC39A-217ENST00000532836 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
TTC39A-217ENST00000532836 BBOX1O75936 387 aa16.47■□□□□ 0.23
TTC39A-217ENST00000532836 RAD17O75943 681 aa16.47■□□□□ 0.23
TTC39A-217ENST00000532836 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
TTC39A-217ENST00000532836 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-217ENST00000532836 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-217ENST00000532836 MICALL2Q8IY33 904 aa16.47■□□□□ 0.23
TTC39A-217ENST00000532836 NLRP3Q96P20 1036 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms