RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
PPFIA1-223ENST00000532793 RASSF7Q02833 373 aa12.78□□□□□ -0.36
PPFIA1-223ENST00000532793 MCM10Q7L590 875 aa12.78□□□□□ -0.36
PPFIA1-223ENST00000532793 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
PPFIA1-223ENST00000532793 ARFGEF2Q9Y6D5 1785 aa12.78□□□□□ -0.36
PPFIA1-223ENST00000532793 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
PPFIA1-223ENST00000532793 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
PPFIA1-223ENST00000532793 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 KCNQ3O43525 872 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 FSTL1Q12841 308 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
PPFIA1-223ENST00000532793 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 NBPF5PQ86XG9 351 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 SMC1BQ8NDV3 1235 aa12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 PNISRQ8TF01 805 aaKnown RBP12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
PPFIA1-223ENST00000532793 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 C21orf2O43822 256 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 CLEC4GQ6UXB4 293 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
PPFIA1-223ENST00000532793 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
PPFIA1-223ENST00000532793 NUP98P52948 1817 aa12.72□□□□□ -0.37
PPFIA1-223ENST00000532793 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
PPFIA1-223ENST00000532793 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
PPFIA1-223ENST00000532793 NFKBIEO00221 500 aa12.71□□□□□ -0.37
PPFIA1-223ENST00000532793 SRGNP10124 158 aa12.71□□□□□ -0.37
PPFIA1-223ENST00000532793 PYGBP11216 843 aa12.71□□□□□ -0.37
PPFIA1-223ENST00000532793 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.37
PPFIA1-223ENST00000532793 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
PPFIA1-223ENST00000532793 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
PPFIA1-223ENST00000532793 RGL2O15211 777 aa12.7□□□□□ -0.38
PPFIA1-223ENST00000532793 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
PPFIA1-223ENST00000532793 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
PPFIA1-223ENST00000532793 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
PPFIA1-223ENST00000532793 NPR1P16066 1061 aa12.69□□□□□ -0.38
PPFIA1-223ENST00000532793 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
PPFIA1-223ENST00000532793 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
PPFIA1-223ENST00000532793 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
PPFIA1-223ENST00000532793 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
PPFIA1-223ENST00000532793 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
PPFIA1-223ENST00000532793 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 PRELPP51888 382 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 NBPF15Q8N660 670 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 SCN4AP35499 1836 aa12.67□□□□□ -0.38
PPFIA1-223ENST00000532793 MYL6BP14649 208 aa12.66□□□□□ -0.38
PPFIA1-223ENST00000532793 HOXB1P14653 301 aaPredicted RBP12.66□□□□□ -0.38
PPFIA1-223ENST00000532793 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
PPFIA1-223ENST00000532793 RALBP1Q15311 655 aa12.66□□□□□ -0.38
PPFIA1-223ENST00000532793 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
PPFIA1-223ENST00000532793 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 EIF4A1P60842 406 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 HTRA3P83110 453 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 HLFQ16534 295 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 RPGRQ92834 1020 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
PPFIA1-223ENST00000532793 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
PPFIA1-223ENST00000532793 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
PPFIA1-223ENST00000532793 DDNO94850 711 aaPredicted RBP12.63□□□□□ -0.39
PPFIA1-223ENST00000532793 RIPK4P57078 832 aa12.63□□□□□ -0.39
PPFIA1-223ENST00000532793 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
PPFIA1-223ENST00000532793 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 GPTP24298 496 aa12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
PPFIA1-223ENST00000532793 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
PPFIA1-223ENST00000532793 WDR43Q15061 677 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms