RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
SYVN1-214ENST00000532771 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
SYVN1-214ENST00000532771 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 POTECB2RU33 542 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
SYVN1-214ENST00000532771 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
SYVN1-214ENST00000532771 CRAMP1Q96RY5 1269 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 UTP14AQ9BVJ6 771 aaKnown RBP12.42□□□□□ -0.42
SYVN1-214ENST00000532771 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 SNED1Q8TER0 1413 aa12.42□□□□□ -0.42
SYVN1-214ENST00000532771 CALD1Q05682 793 aaKnown RBP12.41□□□□□ -0.42
SYVN1-214ENST00000532771 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 CC2D2BQ6DHV5 1058 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 NLRP10Q86W26 655 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
SYVN1-214ENST00000532771 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
SYVN1-214ENST00000532771 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
SYVN1-214ENST00000532771 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
SYVN1-214ENST00000532771 GNAI1P63096 354 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 CCDC184Q52MB2 194 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 RBM17Q96I25 401 aaKnown RBP12.4□□□□□ -0.42
SYVN1-214ENST00000532771 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 PSMD1Q99460 953 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 ANKRD36CQ5JPF3 1778 aa12.4□□□□□ -0.42
SYVN1-214ENST00000532771 IARSP41252 1262 aaKnown RBP12.39□□□□□ -0.43
SYVN1-214ENST00000532771 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
SYVN1-214ENST00000532771 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
SYVN1-214ENST00000532771 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
SYVN1-214ENST00000532771 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
SYVN1-214ENST00000532771 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
SYVN1-214ENST00000532771 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
SYVN1-214ENST00000532771 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
SYVN1-214ENST00000532771 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
SYVN1-214ENST00000532771 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
SYVN1-214ENST00000532771 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
SYVN1-214ENST00000532771 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
SYVN1-214ENST00000532771 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
SYVN1-214ENST00000532771 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
SYVN1-214ENST00000532771 FZD9O00144 591 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
SYVN1-214ENST00000532771 HTRA3P83110 453 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 ABCC4O15439 1325 aa12.36□□□□□ -0.43
SYVN1-214ENST00000532771 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
SYVN1-214ENST00000532771 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
SYVN1-214ENST00000532771 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
SYVN1-214ENST00000532771 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
SYVN1-214ENST00000532771 BBOX1O75936 387 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
SYVN1-214ENST00000532771 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 KLRG1Q96E93 195 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-214ENST00000532771 TAF1DQ9H5J8 278 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-214ENST00000532771 MRS2Q9HD23 443 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 COL4A5P29400 1685 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 SCN4AP35499 1836 aa12.34□□□□□ -0.43
SYVN1-214ENST00000532771 LAMB2P55268 1798 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 ANP32CO43423 234 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 GRAPQ13588 217 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
SYVN1-214ENST00000532771 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
SYVN1-214ENST00000532771 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 GPC2Q8N158 579 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-214ENST00000532771 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-214ENST00000532771 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
SYVN1-214ENST00000532771 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
SYVN1-214ENST00000532771 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
SYVN1-214ENST00000532771 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
SYVN1-214ENST00000532771 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
SYVN1-214ENST00000532771 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
SYVN1-214ENST00000532771 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
SYVN1-214ENST00000532771 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
SYVN1-214ENST00000532771 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
SYVN1-214ENST00000532771 PPIP5K2O43314 1243 aa12.31□□□□□ -0.44
SYVN1-214ENST00000532771 EPHX2P34913 555 aa12.31□□□□□ -0.44
SYVN1-214ENST00000532771 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
SYVN1-214ENST00000532771 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
SYVN1-214ENST00000532771 MPNDQ8N594 471 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms