RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
PCDHA9-202ENST00000532602 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
PCDHA9-202ENST00000532602 MYO1BO43795 1136 aa17.16■□□□□ 0.34
PCDHA9-202ENST00000532602 ERLIN1O75477 346 aa17.16■□□□□ 0.34
PCDHA9-202ENST00000532602 KIF5BP33176 963 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 MRPL50Q8N5N7 158 aaKnown RBP17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 NLRP5P59047 1200 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 MAP7D2Q96T17 732 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 PDE4BQ07343 736 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 PICALMQ13492 652 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 JAKMIP3Q5VZ66 844 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 TSPY2A6NKD2 308 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 FGFR1OPO95684 399 aaKnown RBP17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 ATP7AQ04656 1500 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 FLT4P35916 1363 aa17.15■□□□□ 0.34
PCDHA9-202ENST00000532602 MAP3K11Q16584 847 aa17.14■□□□□ 0.34
PCDHA9-202ENST00000532602 TMEM67Q5HYA8 995 aa17.14■□□□□ 0.34
PCDHA9-202ENST00000532602 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.34
PCDHA9-202ENST00000532602 H0YHG0 523 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 EPB41L2O43491 1005 aaKnown RBP17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 GRM1Q13255 1194 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 UBA5Q9GZZ9 404 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 IL16Q14005 1332 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
PCDHA9-202ENST00000532602 GSTO1P78417 241 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 ECM2O94769 699 aaPredicted RBP17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 FKBP15Q5T1M5 1219 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 LIG1P18858 919 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 VPS36Q86VN1 386 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 GRM8O00222 908 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 ATP10AO60312 1499 aa17.13■□□□□ 0.33
PCDHA9-202ENST00000532602 TRAF1Q13077 416 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 MAP3K5Q99683 1374 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 CYP7A1P22680 504 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 NUP160Q12769 1436 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 SYCE3A1L190 88 aa17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
PCDHA9-202ENST00000532602 EZRP15311 586 aaKnown RBP17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 KIAA1328Q86T90 577 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 SSR1P43307 286 aaKnown RBP17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 TRPM2O94759 1503 aa17.11■□□□□ 0.33
PCDHA9-202ENST00000532602 ANKRD62A6NC57 917 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 GJB2P29033 226 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
PCDHA9-202ENST00000532602 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 ANO10Q9NW15 660 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 GNPATO15228 680 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 LIMCH1Q9UPQ0 1083 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 CETN1Q12798 172 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 FILIP1Q7Z7B0 1213 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 SSFA2P28290 1259 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 SPA17Q15506 151 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 IP6K1Q92551 441 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 TESK2Q96S53 571 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 SLC26A6Q9BXS9 759 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 PCDH11XQ9BZA7 1347 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 PCDH11YQ9BZA8 1340 aa17.09■□□□□ 0.33
PCDHA9-202ENST00000532602 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 523.5 ms