RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 USPL1Q5W0Q7 1092 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 COPS6Q7L5N1 327 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 ADCY9O60503 1353 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 CCDC30Q5VVM6 783 aa10.28□□□□□ -0.76
TRIM49-202ENST00000532501 DZIP3Q86Y13 1208 aaKnown RBP10.28□□□□□ -0.76
TRIM49-202ENST00000532501 DBF4Q9UBU7 674 aaPredicted RBP10.28□□□□□ -0.76
TRIM49-202ENST00000532501 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
TRIM49-202ENST00000532501 F6X3S4 739 aa10.27□□□□□ -0.77
TRIM49-202ENST00000532501 DDR1Q08345 913 aa10.27□□□□□ -0.77
TRIM49-202ENST00000532501 FLIIQ13045 1269 aa10.27□□□□□ -0.77
TRIM49-202ENST00000532501 TRAPPC3LQ5T215 181 aa10.27□□□□□ -0.77
TRIM49-202ENST00000532501 NARFQ9UHQ1 456 aa10.27□□□□□ -0.77
TRIM49-202ENST00000532501 QSER1Q2KHR3 1735 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 MAP3K15Q6ZN16 1313 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 UBN2Q6ZU65 1347 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 TBC1D9BQ66K14 1250 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 ARXQ96QS3 562 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
TRIM49-202ENST00000532501 GPTP24298 496 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 RFC4P35249 363 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 PTGER2P43116 358 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 NFIXQ14938 502 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 HYPKQ9NX55 129 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 CARMIL3Q8ND23 1372 aa10.25□□□□□ -0.77
TRIM49-202ENST00000532501 PI4KAP2A4QPH2 592 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 CCDC24Q8N4L8 307 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 PI4KAP1Q8N8J0 262 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 STK31Q9BXU1 1019 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
TRIM49-202ENST00000532501 ATP5J2-PTCD1G3V325 749 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 PLIN1O60240 522 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 IGKV5-2P06315 115 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 CT47B1P0C2W7 299 aaPredicted RBP10.24□□□□□ -0.77
TRIM49-202ENST00000532501 RLBP1P12271 317 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 ALDH1L2Q3SY69 923 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 SYNE4Q8N205 404 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 RCAN3Q9UKA8 241 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
TRIM49-202ENST00000532501 ATP10DQ9P241 1426 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 ABCC12Q96J65 1359 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 POLRMTO00411 1230 aaKnown RBP10.23□□□□□ -0.77
TRIM49-202ENST00000532501 MMP10P09238 476 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 TM4SF1P30408 202 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
TRIM49-202ENST00000532501 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
TRIM49-202ENST00000532501 FLAD1Q8NFF5 587 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 PLBD2Q8NHP8 589 aa10.23□□□□□ -0.77
TRIM49-202ENST00000532501 JARID2Q92833 1246 aaPredicted RBP10.23□□□□□ -0.77
TRIM49-202ENST00000532501 A0A087WZG4 1122 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 FAM177BA6PVY3 158 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ERVV-1B6SEH8 477 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ZPR1O75312 459 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
TRIM49-202ENST00000532501 CWF19L2Q2TBE0 894 aaKnown RBP10.22□□□□□ -0.77
TRIM49-202ENST00000532501 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 KSR2Q6VAB6 950 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 KIF6Q6ZMV9 814 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ZNF34Q8IZ26 560 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 MYD88Q99836 296 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ISCA1Q9BUE6 129 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 MTFR1LQ9H019 292 aa10.22□□□□□ -0.77
TRIM49-202ENST00000532501 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.77
TRIM49-202ENST00000532501 TRIM27P14373 513 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 TCIRG1Q13488 830 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 SUSD4Q5VX71 490 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 SLC51AQ86UW1 340 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 NLRP10Q86W26 655 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 DNAAF4Q8WXU2 420 aa10.21□□□□□ -0.78
TRIM49-202ENST00000532501 FRAT1Q92837 279 aaPredicted RBP10.21□□□□□ -0.78
TRIM49-202ENST00000532501 METTL22Q9BUU2 404 aaPredicted RBP10.21□□□□□ -0.78
TRIM49-202ENST00000532501 NIP7Q9Y221 180 aaKnown RBP eCLIP10.21□□□□□ -0.78
TRIM49-202ENST00000532501 COL24A1Q17RW2 1714 aa10.2□□□□□ -0.78
TRIM49-202ENST00000532501 NTSR2O95665 410 aa10.2□□□□□ -0.78
TRIM49-202ENST00000532501 BEND3Q5T5X7 828 aa10.2□□□□□ -0.78
TRIM49-202ENST00000532501 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
TRIM49-202ENST00000532501 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
TRIM49-202ENST00000532501 ABCC4O15439 1325 aa10.19□□□□□ -0.78
TRIM49-202ENST00000532501 NEURL1BA8MQ27 555 aa10.19□□□□□ -0.78
TRIM49-202ENST00000532501 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
TRIM49-202ENST00000532501 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
TRIM49-202ENST00000532501 KIF16BQ96L93 1317 aa10.19□□□□□ -0.78
TRIM49-202ENST00000532501 C10orf71Q711Q0 1435 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 SERPINB2P05120 415 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 CASP7P55210 303 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 PRR5LQ6MZQ0 368 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 ATF7IPQ6VMQ6 1270 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 NLGN1Q8N2Q7 840 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 PANK1Q8TE04 598 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 CHMP4AQ9BY43 222 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 COL4A1P02462 1669 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 LRP5O75197 1615 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 PTPRCP08575 1304 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms