RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CALCOCO2Q13137 446 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 PSMD6Q15008 389 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 CNNM3Q8NE01 707 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 CXorf38Q8TB03 319 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 PYM1Q9BRP8 204 aaKnown RBP9.26□□□□□ -0.93
CTNND1-231ENST00000532463 EVC2Q86UK5 1308 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 USP5P45974 858 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 SMAP1Q8IYB5 467 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-231ENST00000532463 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-231ENST00000532463 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
CTNND1-231ENST00000532463 BCAP29Q9UHQ4 241 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 CETN3O15182 167 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 ADCY5O95622 1261 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 ARHGAP25P42331 645 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 LMBR1Q8WVP7 490 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 BICD1Q96G01 975 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 FAM169AQ9Y6X4 670 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 TXNDC9O14530 226 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 TBC1D5Q92609 795 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.26□□□□□ -0.934e-9■□□□□ 9.9
CTNND1-231ENST00000532463 CUX2O14529 1486 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 HSPA1LP34931 641 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 SLC4A8Q2Y0W8 1093 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 OGFRQ9NZT2 677 aa9.26□□□□□ -0.93
CTNND1-231ENST00000532463 VAV2P52735 878 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 IRX4P78413 519 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 CLUL1Q15846 466 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 GSTA5Q7RTV2 222 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 RNF10Q8N5U6 811 aaKnown RBP9.25□□□□□ -0.93
CTNND1-231ENST00000532463 KRT13P13646 458 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 RAB11FIP4Q86YS3 637 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 STRN4Q9NRL3 753 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 CCDC196A0A1B0GTZ2 297 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 SPECC1L-ADORA2AF8WAN1 911 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 WDR46O15213 610 aaKnown RBP9.25□□□□□ -0.93
CTNND1-231ENST00000532463 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 NBPF8Q3BBV2 869 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 KRBA2Q6ZNG9 492 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 HOMEZQ8IX15 550 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 ARHGEF2Q92974 986 aaKnown RBP9.25□□□□□ -0.93
CTNND1-231ENST00000532463 HAUS8Q9BT25 410 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 SPATS2LQ9NUQ6 558 aaKnown RBP9.25□□□□□ -0.93
CTNND1-231ENST00000532463 PUF60Q9UHX1 559 aaKnown RBP9.25□□□□□ -0.93
CTNND1-231ENST00000532463 CCDC88BA6NC98 1476 aa9.25□□□□□ -0.93
CTNND1-231ENST00000532463 SYF2O95926 243 aaKnown RBP9.24□□□□□ -0.93
CTNND1-231ENST00000532463 PDCD2Q16342 344 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-231ENST00000532463 RPAINQ86UA6 219 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 RAPGEF4Q8WZA2 1011 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 CTAGE9A4FU28 777 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 CRCPO75575 148 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 VIMP08670 466 aaKnown RBP9.24□□□□□ -0.93
CTNND1-231ENST00000532463 CCDC62Q6P9F0 684 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 AFAP1L2Q8N4X5 818 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 BACH2Q9BYV9 841 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 DNAI1Q9UI46 699 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 ZC3H6P61129 1189 aaKnown RBP9.24□□□□□ -0.93
CTNND1-231ENST00000532463 MAP3K21Q5TCX8 1036 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 SYNCQ9H7C4 482 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 ZNF287Q9HBT7 754 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 FAN1Q9Y2M0 1017 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 STX6O43752 255 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 FCHSD2O94868 740 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 TAF7Q15545 349 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-231ENST00000532463 KANK3Q6NY19 840 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 KIF6Q6ZMV9 814 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 ZNF354CQ86Y25 554 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 PLEKHH1Q9ULM0 1364 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 TLDC2A0PJX2 215 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 VPS41P49754 854 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 CAPZA3Q96KX2 299 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 LRRC27Q9C0I9 530 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 USP47Q96K76 1375 aa9.24□□□□□ -0.93
CTNND1-231ENST00000532463 PHLDB3Q6NSJ2 640 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 TRIM4Q9C037 500 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 SATB2Q9UPW6 733 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 RRBP1Q9P2E9 1410 aaKnown RBP9.23□□□□□ -0.93
CTNND1-231ENST00000532463 NDUFAB1O14561 156 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 HSP90AA5PQ58FG0 334 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 HDXQ7Z353 690 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 THEGQ9P2T0 379 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 GEN1Q17RS7 908 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 CTAGE1Q96RT6 745 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.935e-7■■■■□ 21
CTNND1-231ENST00000532463 USP37Q86T82 979 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 EHMT1Q9H9B1 1298 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-231ENST00000532463 ANKFY1Q9P2R3 1169 aa9.23□□□□□ -0.93
CTNND1-231ENST00000532463 N4BP3O15049 544 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 CALML4Q96GE6 196 aa9.22□□□□□ -0.93
CTNND1-231ENST00000532463 CACYBPQ9HB71 228 aaKnown RBP9.22□□□□□ -0.93
CTNND1-231ENST00000532463 CLCN1P35523 988 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms