RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ZSCAN30Q86W11 494 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 KLHL34Q8N239 644 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 PDRG1Q9NUG6 133 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.23■□□□□ 0.83
VPS26B-206ENST00000531741 TNS3Q68CZ2 1445 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 STX6O43752 255 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 PHF14O94880 888 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 JAKMIP1Q96N16 626 aaKnown RBP20.23■□□□□ 0.83
VPS26B-206ENST00000531741 SMC3Q9UQE7 1217 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 ATP6V1DQ9Y5K8 247 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.23■□□□□ 0.83
VPS26B-206ENST00000531741 JCADQ9P266 1359 aa20.23■□□□□ 0.83
VPS26B-206ENST00000531741 LAMB4A4D0S4 1761 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 PDIA4P13667 645 aaKnown RBP20.22■□□□□ 0.83
VPS26B-206ENST00000531741 CPDO75976 1380 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 SYT1P21579 422 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 USP48Q86UV5 1035 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
VPS26B-206ENST00000531741 TMEM94Q12767 1356 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 MED23Q9ULK4 1368 aa20.22■□□□□ 0.83
VPS26B-206ENST00000531741 GLI3P10071 1580 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 MYL6BP14649 208 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 NMIQ13287 307 aaPredicted RBP20.21■□□□□ 0.83
VPS26B-206ENST00000531741 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
VPS26B-206ENST00000531741 TTC5Q8N0Z6 440 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 MYD88Q99836 296 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
VPS26B-206ENST00000531741 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
VPS26B-206ENST00000531741 RFX7Q2KHR2 1363 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 CYP27B1O15528 508 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 PSMA5P28066 241 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 TCHHQ07283 1943 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 AFDNP55196 1824 aaKnown RBP20.2■□□□□ 0.82
VPS26B-206ENST00000531741 F13A1P00488 732 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
VPS26B-206ENST00000531741 ALDH8A1Q9H2A2 487 aaPredicted RBP20.2■□□□□ 0.82
VPS26B-206ENST00000531741 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
VPS26B-206ENST00000531741 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
VPS26B-206ENST00000531741 RFX5P48382 616 aaPredicted RBP20.19■□□□□ 0.82
VPS26B-206ENST00000531741 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
VPS26B-206ENST00000531741 LARGE1O95461 756 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 CPA1P15085 419 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 ATP5JP18859 108 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 CADPS2Q86UW7 1296 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 FSD1Q9BTV5 496 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 SIL1Q9H173 461 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 TSPY26PQ9H489 355 aa20.18■□□□□ 0.82
VPS26B-206ENST00000531741 SLC27A2O14975 620 aa20.17■□□□□ 0.82
VPS26B-206ENST00000531741 GADD45BO75293 160 aaPredicted RBP20.17■□□□□ 0.82
VPS26B-206ENST00000531741 BOLA2Q9H3K6 86 aa20.17■□□□□ 0.82
VPS26B-206ENST00000531741 HMG20BQ9P0W2 317 aa20.17■□□□□ 0.82
VPS26B-206ENST00000531741 UBE2HP62256 183 aa20.17■□□□□ 0.82
VPS26B-206ENST00000531741 PTPN12Q05209 780 aaKnown RBP20.17■□□□□ 0.82
VPS26B-206ENST00000531741 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 A0A0D9SFI3 127 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 LETM1O95202 739 aaPredicted RBP20.16■□□□□ 0.82
VPS26B-206ENST00000531741 GJB2P29033 226 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 CSPP1Q1MSJ5 1256 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 GDPD2Q9HCC8 539 aa20.16■□□□□ 0.82
VPS26B-206ENST00000531741 KCNJ4P48050 445 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 PLBD2Q8NHP8 589 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 KLHDC4Q8TBB5 520 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
VPS26B-206ENST00000531741 MTMR6Q9Y217 621 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 ST3GAL1Q11201 340 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 ME3Q16798 604 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 CCDC183Q5T5S1 534 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 FAM184AQ8NB25 1140 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 LARP6Q9BRS8 491 aaKnown RBP20.15■□□□□ 0.82
VPS26B-206ENST00000531741 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
VPS26B-206ENST00000531741 CASP7P55210 303 aa20.14■□□□□ 0.81
VPS26B-206ENST00000531741 CABP4P57796 275 aa20.14■□□□□ 0.81
VPS26B-206ENST00000531741 TNNI3KQ59H18 835 aa20.14■□□□□ 0.81
VPS26B-206ENST00000531741 USPL1Q5W0Q7 1092 aa20.14■□□□□ 0.81
VPS26B-206ENST00000531741 FPGT-TNNI3KV9GXZ4 949 aa20.14■□□□□ 0.81
VPS26B-206ENST00000531741 DDX17Q92841 729 aaKnown RBP20.14■□□□□ 0.81
VPS26B-206ENST00000531741 MSNP26038 577 aaKnown RBP20.13■□□□□ 0.81
VPS26B-206ENST00000531741 TICAM2Q86XR7 235 aa20.13■□□□□ 0.81
VPS26B-206ENST00000531741 DBNLQ9UJU6 430 aaKnown RBP20.13■□□□□ 0.81
VPS26B-206ENST00000531741 TPCN1Q9ULQ1 816 aa20.13■□□□□ 0.81
VPS26B-206ENST00000531741 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
VPS26B-206ENST00000531741 MCM5P33992 734 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
VPS26B-206ENST00000531741 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
VPS26B-206ENST00000531741 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 TAF5LO75529 589 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms