RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
PCDHA8-202ENST00000531613 GBP3Q9H0R5 595 aa20.14■□□□□ 0.81
PCDHA8-202ENST00000531613 CKAP2LQ8IYA6 745 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 MYO1BO43795 1136 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 MCM5P33992 734 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 CCDC150Q8NCX0 1101 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 IL27Q8NEV9 243 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 UQCRHLA0A096LP55 91 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 UQCRHP07919 91 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 TSHZ3Q63HK5 1081 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 SETDB2Q96T68 719 aa20.13■□□□□ 0.81
PCDHA8-202ENST00000531613 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
PCDHA8-202ENST00000531613 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
PCDHA8-202ENST00000531613 NLRP3Q96P20 1036 aa20.12■□□□□ 0.81
PCDHA8-202ENST00000531613 MEIS3Q99687 375 aa20.12■□□□□ 0.81
PCDHA8-202ENST00000531613 SLC26A6Q9BXS9 759 aa20.12■□□□□ 0.81
PCDHA8-202ENST00000531613 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 TDRD12Q587J7 1177 aaKnown RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 PAXIP1Q6ZW49 1069 aaPredicted RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 USO1O60763 962 aaKnown RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 YEATS4O95619 227 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 MTIF2P46199 727 aaKnown RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 STXBP4Q6ZWJ1 553 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 CLIP2Q9UDT6 1046 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 GRM8O00222 908 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 PLCH2O75038 1416 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 CRACR2AQ9BSW2 395 aa20.11■□□□□ 0.81
PCDHA8-202ENST00000531613 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 KSR2Q6VAB6 950 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 WTAPQ15007 396 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 KANK3Q6NY19 840 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 KIF18AQ8NI77 898 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 KRT23Q9C075 422 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 TEX14Q8IWB6 1497 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 UBAP1LF5GYI3 381 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 IL15P40933 162 aaPredicted RBP20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
PCDHA8-202ENST00000531613 DDB1Q16531 1140 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 CCDC178Q5BJE1 867 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 CYP7A1P22680 504 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 CCDC40Q4G0X9 1142 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 TMTC2Q8N394 836 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 PRKCSHP14314 528 aaPredicted RBP20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 TAF3Q5VWG9 929 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 TCERG1LQ5VWI1 586 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 BRF1Q92994 677 aa20.09■□□□□ 0.81
PCDHA8-202ENST00000531613 A2MP01023 1474 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 TRAF1Q13077 416 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 ESR2Q92731 530 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 CCDC102BQ68D86 513 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 LRRC27Q9C0I9 530 aa20.08■□□□□ 0.81
PCDHA8-202ENST00000531613 STX1AQ16623 288 aa20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 GDPD2Q9HCC8 539 aa20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 KLF18A0A0U1RQI7 1052 aa20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 LIG1P18858 919 aa20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.8
PCDHA8-202ENST00000531613 BIN1O00499 593 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 PAFAH1B1P43034 410 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 PPP4R3BQ5MIZ7 849 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 LUZP1Q86V48 1076 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 CPLX3Q8WVH0 158 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 ZSCAN16Q9H4T2 348 aaPredicted RBP20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 CNNM2Q9H8M5 875 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 NUCB1Q02818 461 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 PANK2Q9BZ23 570 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 SAMM50Q9Y512 469 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 ANAPC15P60006 121 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 TMCO3Q6UWJ1 677 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 URI1O94763 535 aaPredicted RBP20.07■□□□□ 0.8
PCDHA8-202ENST00000531613 ZBTB43O43298 467 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 IGHDP01880 384 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 NEMFO60524 1076 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 TSPY3P0CV98 308 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 TSPY8P0CW00 308 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 TRMT1LQ7Z2T5 733 aaKnown RBP20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 FAM114A1Q8IWE2 563 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 SDSP20132 328 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 USP25Q9UHP3 1055 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
PCDHA8-202ENST00000531613 PDE1AP54750 535 aa20.05■□□□□ 0.8
PCDHA8-202ENST00000531613 HDAC9Q9UKV0 1011 aa20.05■□□□□ 0.8
PCDHA8-202ENST00000531613 DUOX2Q9NRD8 1548 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms