RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ERFEQ4G0M1 354 aa15.23■□□□□ 0.03
LTBP3-219ENST00000530990 ZNF428Q96B54 188 aa15.23■□□□□ 0.03
LTBP3-219ENST00000530990 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
LTBP3-219ENST00000530990 SLX4Q8IY92 1834 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 GTF2E1P29083 439 aaPredicted RBP15.22■□□□□ 0.03
LTBP3-219ENST00000530990 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 MYD88Q99836 296 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
LTBP3-219ENST00000530990 PIM2Q9P1W9 311 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
LTBP3-219ENST00000530990 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
LTBP3-219ENST00000530990 H0YIN7 160 aa15.21■□□□□ 0.03
LTBP3-219ENST00000530990 KSR2Q6VAB6 950 aa15.21■□□□□ 0.03
LTBP3-219ENST00000530990 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
LTBP3-219ENST00000530990 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
LTBP3-219ENST00000530990 SRGNP10124 158 aa15.2■□□□□ 0.02
LTBP3-219ENST00000530990 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
LTBP3-219ENST00000530990 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
LTBP3-219ENST00000530990 PDZRN3Q9UPQ7 1066 aa15.2■□□□□ 0.02
LTBP3-219ENST00000530990 RNF123Q5XPI4 1314 aa15.19■□□□□ 0.02
LTBP3-219ENST00000530990 MYH3P11055 1940 aa15.19■□□□□ 0.02
LTBP3-219ENST00000530990 KLRG2A4D1S0 409 aaPredicted RBP15.19■□□□□ 0.02
LTBP3-219ENST00000530990 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
LTBP3-219ENST00000530990 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
LTBP3-219ENST00000530990 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.02
LTBP3-219ENST00000530990 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
LTBP3-219ENST00000530990 SH3TC1Q8TE82 1336 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 TAF1P21675 1872 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 SBF1O95248 1867 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 FER1L6Q2WGJ9 1857 aa15.18■□□□□ 0.02
LTBP3-219ENST00000530990 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
LTBP3-219ENST00000530990 CRY2Q49AN0 593 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 STYK1Q6J9G0 422 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
LTBP3-219ENST00000530990 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
LTBP3-219ENST00000530990 CCDC88AQ3V6T2 1871 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 F6X3S4 739 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 HCLS1P14317 486 aaPredicted RBP15.16■□□□□ 0.02
LTBP3-219ENST00000530990 NPR1P16066 1061 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
LTBP3-219ENST00000530990 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
LTBP3-219ENST00000530990 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
LTBP3-219ENST00000530990 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
LTBP3-219ENST00000530990 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
LTBP3-219ENST00000530990 CT47B1P0C2W7 299 aaPredicted RBP15.15■□□□□ 0.02
LTBP3-219ENST00000530990 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
LTBP3-219ENST00000530990 PRPF40BQ6NWY9 871 aaKnown RBP15.15■□□□□ 0.02
LTBP3-219ENST00000530990 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
LTBP3-219ENST00000530990 CNKSR1Q969H4 720 aa15.15■□□□□ 0.02
LTBP3-219ENST00000530990 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
LTBP3-219ENST00000530990 COL4A1P02462 1669 aa15.15■□□□□ 0.02
LTBP3-219ENST00000530990 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
LTBP3-219ENST00000530990 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
LTBP3-219ENST00000530990 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
LTBP3-219ENST00000530990 NLRP3Q96P20 1036 aa15.14■□□□□ 0.01
LTBP3-219ENST00000530990 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
LTBP3-219ENST00000530990 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
LTBP3-219ENST00000530990 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
LTBP3-219ENST00000530990 JARID2Q92833 1246 aaPredicted RBP15.13■□□□□ 0.01
LTBP3-219ENST00000530990 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
LTBP3-219ENST00000530990 LRRC37AA6NMS7 1700 aa15.12■□□□□ 0.01
LTBP3-219ENST00000530990 IRS4O14654 1257 aaPredicted RBP15.12■□□□□ 0.01
LTBP3-219ENST00000530990 C21orf2O43822 256 aa15.12■□□□□ 0.01
LTBP3-219ENST00000530990 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
LTBP3-219ENST00000530990 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
LTBP3-219ENST00000530990 PTPRCP08575 1304 aa15.12■□□□□ 0.01
LTBP3-219ENST00000530990 DICER1Q9UPY3 1922 aaKnown RBP15.11■□□□□ 0.01
LTBP3-219ENST00000530990 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
LTBP3-219ENST00000530990 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
LTBP3-219ENST00000530990 RASSF7Q02833 373 aa15.11■□□□□ 0.01
LTBP3-219ENST00000530990 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
LTBP3-219ENST00000530990 ABCC4O15439 1325 aa15.11■□□□□ 0.01
LTBP3-219ENST00000530990 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
LTBP3-219ENST00000530990 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
LTBP3-219ENST00000530990 GCKRQ14397 625 aa15.1■□□□□ 0.01
LTBP3-219ENST00000530990 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
LTBP3-219ENST00000530990 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
LTBP3-219ENST00000530990 RBM17Q96I25 401 aaKnown RBP15.1■□□□□ 0.01
LTBP3-219ENST00000530990 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 NFKBIEO00221 500 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 OLFM4Q6UX06 510 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
LTBP3-219ENST00000530990 H7C1W4 665 aa15.08■□□□□ 0
LTBP3-219ENST00000530990 PDE8AO60658 829 aa15.08■□□□□ 0
LTBP3-219ENST00000530990 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
LTBP3-219ENST00000530990 CASP7P55210 303 aa15.08■□□□□ 0
LTBP3-219ENST00000530990 SF3B3Q15393 1217 aaKnown RBP15.08■□□□□ 0
LTBP3-219ENST00000530990 PPEF1O14829 653 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms