RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
CCS-206ENST00000530961 HSPA1AP0DMV8 641 aaKnown RBP19.48■□□□□ 0.71
CCS-206ENST00000530961 HSPA1BP0DMV9 641 aaKnown RBP19.48■□□□□ 0.71
CCS-206ENST00000530961 GTF2E1P29083 439 aaPredicted RBP19.48■□□□□ 0.71
CCS-206ENST00000530961 ST5P78524 1137 aa19.48■□□□□ 0.71
CCS-206ENST00000530961 NEXNQ0ZGT2 675 aa19.48■□□□□ 0.71
CCS-206ENST00000530961 SUSD4Q5VX71 490 aa19.48■□□□□ 0.71
CCS-206ENST00000530961 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
CCS-206ENST00000530961 UTP14AQ9BVJ6 771 aaKnown RBP19.48■□□□□ 0.71
CCS-206ENST00000530961 PTPRCP08575 1304 aa19.48■□□□□ 0.71
CCS-206ENST00000530961 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
CCS-206ENST00000530961 PCNTO95613 3336 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 DNAAF4Q8WXU2 420 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 MYD88Q99836 296 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 BCL2L13Q9BXK5 485 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 RNF123Q5XPI4 1314 aa19.47■□□□□ 0.71
CCS-206ENST00000530961 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
CCS-206ENST00000530961 ATP5J2-PTCD1G3V325 749 aa19.46■□□□□ 0.71
CCS-206ENST00000530961 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
CCS-206ENST00000530961 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
CCS-206ENST00000530961 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
CCS-206ENST00000530961 C10orf71Q711Q0 1435 aa19.45■□□□□ 0.7
CCS-206ENST00000530961 PDE6BP35913 854 aa19.45■□□□□ 0.7
CCS-206ENST00000530961 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
CCS-206ENST00000530961 NTSR2O95665 410 aa19.44■□□□□ 0.7
CCS-206ENST00000530961 FSTL1Q12841 308 aa19.44■□□□□ 0.7
CCS-206ENST00000530961 TRMT112Q9UI30 125 aaKnown RBP19.44■□□□□ 0.7
CCS-206ENST00000530961 SLC10A5Q5PT55 438 aa19.43■□□□□ 0.7
CCS-206ENST00000530961 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
CCS-206ENST00000530961 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
CCS-206ENST00000530961 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
CCS-206ENST00000530961 SCN7AQ01118 1682 aa19.43■□□□□ 0.7
CCS-206ENST00000530961 F6X3S4 739 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
CCS-206ENST00000530961 IGKV5-2P06315 115 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 ERFEQ4G0M1 354 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 NUTM1Q86Y26 1132 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
CCS-206ENST00000530961 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
CCS-206ENST00000530961 KLRG2A4D1S0 409 aaPredicted RBP19.41■□□□□ 0.7
CCS-206ENST00000530961 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
CCS-206ENST00000530961 H0YIN7 160 aa19.41■□□□□ 0.7
CCS-206ENST00000530961 HSP90B1P14625 803 aaKnown RBP19.41■□□□□ 0.7
CCS-206ENST00000530961 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
CCS-206ENST00000530961 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
CCS-206ENST00000530961 API5Q9BZZ5 524 aaKnown RBP19.41■□□□□ 0.7
CCS-206ENST00000530961 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
CCS-206ENST00000530961 BCAR3O75815 825 aa19.4■□□□□ 0.7
CCS-206ENST00000530961 DPEP1P16444 411 aa19.4■□□□□ 0.7
CCS-206ENST00000530961 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
CCS-206ENST00000530961 CWF19L2Q2TBE0 894 aaKnown RBP19.39■□□□□ 0.69
CCS-206ENST00000530961 FAM161AQ3B820 660 aa19.39■□□□□ 0.69
CCS-206ENST00000530961 SLC4A10Q6U841 1118 aa19.39■□□□□ 0.69
CCS-206ENST00000530961 C2CD5Q86YS7 1000 aa19.39■□□□□ 0.69
CCS-206ENST00000530961 NMRK2Q9NPI5 230 aa19.39■□□□□ 0.69
CCS-206ENST00000530961 ALDH1L1O75891 902 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
CCS-206ENST00000530961 GCKRQ14397 625 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 FAM89AQ96GI7 184 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 NLRP3Q96P20 1036 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 SRCIN1Q9C0H9 1055 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 PIM2Q9P1W9 311 aa19.38■□□□□ 0.69
CCS-206ENST00000530961 KCNA3P22001 575 aa19.37■□□□□ 0.69
CCS-206ENST00000530961 CHRNA5P30532 468 aa19.37■□□□□ 0.69
CCS-206ENST00000530961 RCAN3Q9UKA8 241 aa19.37■□□□□ 0.69
CCS-206ENST00000530961 IRS4O14654 1257 aaPredicted RBP19.36■□□□□ 0.69
CCS-206ENST00000530961 SRGNP10124 158 aa19.36■□□□□ 0.69
CCS-206ENST00000530961 MASTLQ96GX5 879 aa19.36■□□□□ 0.69
CCS-206ENST00000530961 BCORQ6W2J9 1755 aa19.36■□□□□ 0.69
CCS-206ENST00000530961 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 H7C1W4 665 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
CCS-206ENST00000530961 NPR1P16066 1061 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
CCS-206ENST00000530961 CRY2Q49AN0 593 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 STYK1Q6J9G0 422 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 ATF7IPQ6VMQ6 1270 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 SYNE4Q8N205 404 aa19.35■□□□□ 0.69
CCS-206ENST00000530961 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
CCS-206ENST00000530961 CDHR2Q9BYE9 1310 aa19.34■□□□□ 0.69
CCS-206ENST00000530961 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
CCS-206ENST00000530961 CNKSR1Q969H4 720 aa19.34■□□□□ 0.69
CCS-206ENST00000530961 TRIM27P14373 513 aa19.33■□□□□ 0.68
CCS-206ENST00000530961 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
CCS-206ENST00000530961 TTLL6Q8N841 843 aa19.33■□□□□ 0.68
CCS-206ENST00000530961 ZNF622Q969S3 477 aaKnown RBP eCLIP19.33■□□□□ 0.688e-7■□□□□ 10.2
CCS-206ENST00000530961 GRM8O00222 908 aa19.32■□□□□ 0.68
CCS-206ENST00000530961 PDE8AO60658 829 aa19.32■□□□□ 0.68
CCS-206ENST00000530961 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
CCS-206ENST00000530961 HOXA10P31260 410 aaPredicted RBP19.32■□□□□ 0.68
CCS-206ENST00000530961 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
CCS-206ENST00000530961 RPGRQ92834 1020 aaKnown RBP19.32■□□□□ 0.68
CCS-206ENST00000530961 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
CCS-206ENST00000530961 UBE3BQ7Z3V4 1068 aa19.31■□□□□ 0.68
CCS-206ENST00000530961 RBM17Q96I25 401 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms