RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PCDH11XQ9BZA7 1347 aa20.69■□□□□ 0.9
BRCA2-204ENST00000530893 PCDH11YQ9BZA8 1340 aa20.69■□□□□ 0.9
BRCA2-204ENST00000530893 PTH1RQ03431 593 aa20.69■□□□□ 0.9
BRCA2-204ENST00000530893 MAP4K1Q92918 833 aa20.69■□□□□ 0.9
BRCA2-204ENST00000530893 TRIM44Q96DX7 344 aaPredicted RBP20.69■□□□□ 0.9
BRCA2-204ENST00000530893 PPP1R9BQ96SB3 815 aa20.69■□□□□ 0.9
BRCA2-204ENST00000530893 CCDC8Q9H0W5 538 aaPredicted RBP20.69■□□□□ 0.9
BRCA2-204ENST00000530893 SH2B1Q9NRF2 756 aaPredicted RBP20.69■□□□□ 0.9
BRCA2-204ENST00000530893 WDR17Q8IZU2 1322 aa20.68■□□□□ 0.9
BRCA2-204ENST00000530893 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
BRCA2-204ENST00000530893 CYP46A1Q9Y6A2 500 aa20.68■□□□□ 0.9
BRCA2-204ENST00000530893 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
BRCA2-204ENST00000530893 SIL1Q9H173 461 aa20.68■□□□□ 0.9
BRCA2-204ENST00000530893 XIRP1Q702N8 1843 aaKnown RBP20.67■□□□□ 0.9
BRCA2-204ENST00000530893 RFX7Q2KHR2 1363 aa20.67■□□□□ 0.9
BRCA2-204ENST00000530893 RFX5P48382 616 aaPredicted RBP20.67■□□□□ 0.9
BRCA2-204ENST00000530893 PRPF40BQ6NWY9 871 aaKnown RBP20.67■□□□□ 0.9
BRCA2-204ENST00000530893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.67■□□□□ 0.9
BRCA2-204ENST00000530893 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
BRCA2-204ENST00000530893 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 PDIA4P13667 645 aaKnown RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 CLCN1P35523 988 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 JAKMIP1Q96N16 626 aaKnown RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 PDRG1Q9NUG6 133 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 RPAP1Q9BWH6 1393 aaPredicted RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 ATP5JP18859 108 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 PSMA5P28066 241 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 PTPN12Q05209 780 aaKnown RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 RNF20Q5VTR2 975 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 FOXD4L5Q5VV16 416 aaPredicted RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 FOXD4L4Q8WXT5 416 aaPredicted RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 FSD1Q9BTV5 496 aa20.66■□□□□ 0.9
BRCA2-204ENST00000530893 TLR7Q9NYK1 1049 aaKnown RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 RBM8AQ9Y5S9 174 aaKnown RBP20.66■□□□□ 0.9
BRCA2-204ENST00000530893 LRSAM1Q6UWE0 723 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 BRINP3Q76B58 766 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 TMEM87AQ8NBN3 555 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
BRCA2-204ENST00000530893 SMC3Q9UQE7 1217 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 ATP6V1DQ9Y5K8 247 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 JCADQ9P266 1359 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 MED23Q9ULK4 1368 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 BOLA2Q9H3K6 86 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
BRCA2-204ENST00000530893 A0A087WZG4 1122 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 ZSCAN22P10073 491 aaPredicted RBP20.64■□□□□ 0.89
BRCA2-204ENST00000530893 NKX1-1Q15270 411 aaPredicted RBP20.64■□□□□ 0.89
BRCA2-204ENST00000530893 TNNI3KQ59H18 835 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 FAM227BQ96M60 508 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 HMG20BQ9P0W2 317 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 FPGT-TNNI3KV9GXZ4 949 aa20.64■□□□□ 0.89
BRCA2-204ENST00000530893 KCNJ4P48050 445 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 CASP7P55210 303 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 STX6O43752 255 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 ADCK5Q3MIX3 580 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 TICAM2Q86XR7 235 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 ALDH8A1Q9H2A2 487 aaPredicted RBP20.63■□□□□ 0.89
BRCA2-204ENST00000530893 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
BRCA2-204ENST00000530893 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
BRCA2-204ENST00000530893 COL5A2P05997 1499 aaPredicted RBP20.62■□□□□ 0.89
BRCA2-204ENST00000530893 ESPNB1AK53 854 aa20.62■□□□□ 0.89
BRCA2-204ENST00000530893 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
BRCA2-204ENST00000530893 PHF14O94880 888 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
BRCA2-204ENST00000530893 TSGA10IPQ3SY00 556 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 RBM27Q9P2N5 1060 aaKnown RBP20.61■□□□□ 0.89
BRCA2-204ENST00000530893 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 H7C1W4 665 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 SLC27A2O14975 620 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 SYT1P21579 422 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 KLHL34Q8N239 644 aa20.61■□□□□ 0.89
BRCA2-204ENST00000530893 DBNLQ9UJU6 430 aaKnown RBP20.61■□□□□ 0.89
BRCA2-204ENST00000530893 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
BRCA2-204ENST00000530893 TFCP2Q12800 502 aa20.6■□□□□ 0.89
BRCA2-204ENST00000530893 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
BRCA2-204ENST00000530893 KCPQ6ZWJ8 1503 aa20.6■□□□□ 0.89
BRCA2-204ENST00000530893 ATP5J2-PTCD1G3V325 749 aa20.6■□□□□ 0.89
BRCA2-204ENST00000530893 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
BRCA2-204ENST00000530893 CARD10Q9BWT7 1032 aa20.6■□□□□ 0.89
BRCA2-204ENST00000530893 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
BRCA2-204ENST00000530893 CPA1P15085 419 aa20.59■□□□□ 0.89
BRCA2-204ENST00000530893 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
BRCA2-204ENST00000530893 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
BRCA2-204ENST00000530893 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
BRCA2-204ENST00000530893 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
BRCA2-204ENST00000530893 RBSNQ9H1K0 784 aa20.59■□□□□ 0.89
BRCA2-204ENST00000530893 SYCE3A1L190 88 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 F13A1P00488 732 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 IL2RBP14784 551 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 USPL1Q5W0Q7 1092 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms