RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 UTP14AQ9BVJ6 771 aaKnown RBP24.37■■□□□ 1.49
PCNX3-203ENST00000530174 KIF3CO14782 793 aa24.36■■□□□ 1.49
PCNX3-203ENST00000530174 SOGA3Q5TF21 947 aa24.36■■□□□ 1.49
PCNX3-203ENST00000530174 ANKRD13DQ6ZTN6 518 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 NLRP10Q86W26 655 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 TAOK3Q9H2K8 898 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 TIAM2Q8IVF5 1701 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 IL16Q14005 1332 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 LTBP3Q9NS15 1303 aa24.35■■□□□ 1.49
PCNX3-203ENST00000530174 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
PCNX3-203ENST00000530174 ALDH1B1P30837 517 aa24.34■■□□□ 1.49
PCNX3-203ENST00000530174 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
PCNX3-203ENST00000530174 TSPYL6Q8N831 410 aa24.34■■□□□ 1.49
PCNX3-203ENST00000530174 NMRK2Q9NPI5 230 aa24.34■■□□□ 1.49
PCNX3-203ENST00000530174 SALL2Q9Y467 1007 aaPredicted RBP24.34■■□□□ 1.49
PCNX3-203ENST00000530174 RNF123Q5XPI4 1314 aa24.34■■□□□ 1.49
PCNX3-203ENST00000530174 CCDC93Q567U6 631 aa24.33■■□□□ 1.49
PCNX3-203ENST00000530174 RPGRQ92834 1020 aaKnown RBP24.33■■□□□ 1.49
PCNX3-203ENST00000530174 PHAXQ9H814 394 aaKnown RBP24.32■■□□□ 1.48
PCNX3-203ENST00000530174 KDM2BQ8NHM5 1336 aa24.32■■□□□ 1.48
PCNX3-203ENST00000530174 HOXA10P31260 410 aaPredicted RBP24.31■■□□□ 1.48
PCNX3-203ENST00000530174 SLC10A5Q5PT55 438 aa24.31■■□□□ 1.48
PCNX3-203ENST00000530174 OLFM4Q6UX06 510 aa24.31■■□□□ 1.48
PCNX3-203ENST00000530174 CCDC30Q5VVM6 783 aa24.3■■□□□ 1.48
PCNX3-203ENST00000530174 NLRP3Q96P20 1036 aa24.3■■□□□ 1.48
PCNX3-203ENST00000530174 TRMT112Q9UI30 125 aaKnown RBP24.3■■□□□ 1.48
PCNX3-203ENST00000530174 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
PCNX3-203ENST00000530174 GOLGA2Q08379 1002 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 SYNE4Q8N205 404 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 ZNF428Q96B54 188 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 RBM17Q96I25 401 aaKnown RBP24.29■■□□□ 1.48
PCNX3-203ENST00000530174 ISCA1Q9BUE6 129 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 CHMP4AQ9BY43 222 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 SH3TC1Q8TE82 1336 aa24.29■■□□□ 1.48
PCNX3-203ENST00000530174 ATP5J2-PTCD1G3V325 749 aa24.28■■□□□ 1.48
PCNX3-203ENST00000530174 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
PCNX3-203ENST00000530174 RIC3Q7Z5B4 369 aa24.28■■□□□ 1.48
PCNX3-203ENST00000530174 WDR63Q8IWG1 891 aa24.28■■□□□ 1.48
PCNX3-203ENST00000530174 CRAMP1Q96RY5 1269 aa24.28■■□□□ 1.48
PCNX3-203ENST00000530174 FKBP4Q02790 459 aaKnown RBP eCLIP24.27■■□□□ 1.48
PCNX3-203ENST00000530174 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
PCNX3-203ENST00000530174 RTKN2Q8IZC4 609 aa24.27■■□□□ 1.48
PCNX3-203ENST00000530174 FANCIQ9NVI1 1328 aa24.27■■□□□ 1.48
PCNX3-203ENST00000530174 LAMB2P55268 1798 aa24.26■■□□□ 1.47
PCNX3-203ENST00000530174 GLTPD2A6NH11 291 aa24.26■■□□□ 1.47
PCNX3-203ENST00000530174 SNED1Q8TER0 1413 aa24.26■■□□□ 1.47
PCNX3-203ENST00000530174 RRAGCQ9HB90 399 aa24.25■■□□□ 1.47
PCNX3-203ENST00000530174 TCERG1O14776 1098 aaKnown RBP24.24■■□□□ 1.47
PCNX3-203ENST00000530174 PPEF1O14829 653 aaPredicted RBP24.24■■□□□ 1.47
PCNX3-203ENST00000530174 TRIM28Q13263 835 aaKnown RBP24.24■■□□□ 1.47
PCNX3-203ENST00000530174 ZNF277Q9NRM2 450 aaPredicted RBP24.24■■□□□ 1.47
PCNX3-203ENST00000530174 TOMM70O94826 608 aa24.23■■□□□ 1.47
PCNX3-203ENST00000530174 SLC51AQ86UW1 340 aa24.23■■□□□ 1.47
PCNX3-203ENST00000530174 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
PCNX3-203ENST00000530174 DDX60Q8IY21 1712 aaKnown RBP24.23■■□□□ 1.47
PCNX3-203ENST00000530174 ABCC4O15439 1325 aa24.22■■□□□ 1.47
PCNX3-203ENST00000530174 DDX58O95786 925 aaKnown RBP24.22■■□□□ 1.47
PCNX3-203ENST00000530174 CC2D2BQ6DHV5 1058 aa24.22■■□□□ 1.47
PCNX3-203ENST00000530174 FAM89AQ96GI7 184 aa24.22■■□□□ 1.47
PCNX3-203ENST00000530174 MYD88Q99836 296 aa24.22■■□□□ 1.47
PCNX3-203ENST00000530174 DPY19L2Q6NUT2 758 aa24.21■■□□□ 1.47
PCNX3-203ENST00000530174 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
PCNX3-203ENST00000530174 C16orf71Q8IYS4 520 aaPredicted RBP24.2■■□□□ 1.46
PCNX3-203ENST00000530174 PSMD1Q99460 953 aa24.2■■□□□ 1.46
PCNX3-203ENST00000530174 EXOSC9Q06265 439 aaKnown RBP24.19■■□□□ 1.46
PCNX3-203ENST00000530174 RTL5Q5HYW3 569 aaPredicted RBP24.19■■□□□ 1.46
PCNX3-203ENST00000530174 METTL22Q9BUU2 404 aaPredicted RBP24.19■■□□□ 1.46
PCNX3-203ENST00000530174 IARSP41252 1262 aaKnown RBP24.18■■□□□ 1.46
PCNX3-203ENST00000530174 DDX46Q7L014 1031 aaKnown RBP24.18■■□□□ 1.46
PCNX3-203ENST00000530174 MAP3K2Q9Y2U5 619 aa24.18■■□□□ 1.46
PCNX3-203ENST00000530174 WDR90Q96KV7 1748 aa24.18■■□□□ 1.46
PCNX3-203ENST00000530174 IRS4O14654 1257 aaPredicted RBP24.17■■□□□ 1.46
PCNX3-203ENST00000530174 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 GRIPAP1Q4V328 841 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 KSR2Q6VAB6 950 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 G2E3Q7L622 706 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 ZBTB38Q8NAP3 1195 aaPredicted RBP24.17■■□□□ 1.46
PCNX3-203ENST00000530174 CCDC191Q8NCU4 936 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 RBM46Q8TBY0 533 aaKnown RBP24.17■■□□□ 1.46
PCNX3-203ENST00000530174 ATP6V0A2Q9Y487 856 aa24.17■■□□□ 1.46
PCNX3-203ENST00000530174 PI4KAP2A4QPH2 592 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 VAMP4O75379 141 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 VEGFAP15692 232 aaPredicted RBP24.16■■□□□ 1.46
PCNX3-203ENST00000530174 HSPA6P17066 643 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 GRAPQ13588 217 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 PI4KAP1Q8N8J0 262 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 GRAPLQ8TC17 118 aaPredicted RBP24.16■■□□□ 1.46
PCNX3-203ENST00000530174 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
PCNX3-203ENST00000530174 TAF1P21675 1872 aa24.15■■□□□ 1.46
PCNX3-203ENST00000530174 POTECB2RU33 542 aa24.15■■□□□ 1.46
PCNX3-203ENST00000530174 BBOX1O75936 387 aa24.15■■□□□ 1.46
PCNX3-203ENST00000530174 DDNO94850 711 aaPredicted RBP24.15■■□□□ 1.46
PCNX3-203ENST00000530174 SF3B3Q15393 1217 aaKnown RBP24.15■■□□□ 1.46
PCNX3-203ENST00000530174 TMX4Q9H1E5 349 aaPredicted RBP24.15■■□□□ 1.46
PCNX3-203ENST00000530174 CWC25Q9NXE8 425 aaPredicted RBP24.15■■□□□ 1.46
PCNX3-203ENST00000530174 ZNF521Q96K83 1311 aa24.14■■□□□ 1.46
PCNX3-203ENST00000530174 ZNF541Q9H0D2 1346 aa24.13■■□□□ 1.45
PCNX3-203ENST00000530174 PCCAP05165 728 aaPredicted RBP24.13■■□□□ 1.45
PCNX3-203ENST00000530174 SP8Q8IXZ3 490 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms