RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
SMCO4-205ENST00000529714 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
SMCO4-205ENST00000529714 DDX19BQ9UMR2 479 aa17.22■□□□□ 0.35
SMCO4-205ENST00000529714 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
SMCO4-205ENST00000529714 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
SMCO4-205ENST00000529714 GRM8O00222 908 aa17.21■□□□□ 0.35
SMCO4-205ENST00000529714 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
SMCO4-205ENST00000529714 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
SMCO4-205ENST00000529714 UTYO14607 1347 aa17.21■□□□□ 0.34
SMCO4-205ENST00000529714 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
SMCO4-205ENST00000529714 NTSR2O95665 410 aa17.2■□□□□ 0.34
SMCO4-205ENST00000529714 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
SMCO4-205ENST00000529714 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
SMCO4-205ENST00000529714 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
SMCO4-205ENST00000529714 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
SMCO4-205ENST00000529714 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
SMCO4-205ENST00000529714 H7C1W4 665 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 MMP10P09238 476 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 DDR1Q08345 913 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-205ENST00000529714 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-205ENST00000529714 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-205ENST00000529714 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
SMCO4-205ENST00000529714 HDAC5Q9UQL6 1122 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
SMCO4-205ENST00000529714 LAMB2P55268 1798 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
SMCO4-205ENST00000529714 SERPINB2P05120 415 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 GNAI3P08754 354 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 SH3TC1Q8TE82 1336 aa17.18■□□□□ 0.34
SMCO4-205ENST00000529714 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
SMCO4-205ENST00000529714 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
SMCO4-205ENST00000529714 CASP7P55210 303 aa17.17■□□□□ 0.34
SMCO4-205ENST00000529714 AAMPQ13685 434 aa17.17■□□□□ 0.34
SMCO4-205ENST00000529714 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-205ENST00000529714 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-205ENST00000529714 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
SMCO4-205ENST00000529714 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
SMCO4-205ENST00000529714 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
SMCO4-205ENST00000529714 MEIS3Q99687 375 aa17.16■□□□□ 0.34
SMCO4-205ENST00000529714 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
SMCO4-205ENST00000529714 NEFLP07196 543 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 POLD1P28340 1107 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 PLA2G12BQ9BX93 195 aa17.15■□□□□ 0.34
SMCO4-205ENST00000529714 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
SMCO4-205ENST00000529714 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
SMCO4-205ENST00000529714 ST5P78524 1137 aa17.14■□□□□ 0.33
SMCO4-205ENST00000529714 SGIP1Q9BQI5 828 aa17.14■□□□□ 0.33
SMCO4-205ENST00000529714 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
SMCO4-205ENST00000529714 MYH3P11055 1940 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 IRS4O14654 1257 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-205ENST00000529714 NPHP1O15259 732 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 GNAI2P04899 355 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 SPON1Q9HCB6 807 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-205ENST00000529714 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
SMCO4-205ENST00000529714 PTGER2P43116 358 aa17.12■□□□□ 0.33
SMCO4-205ENST00000529714 PDE8AO60658 829 aa17.11■□□□□ 0.33
SMCO4-205ENST00000529714 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-205ENST00000529714 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
SMCO4-205ENST00000529714 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
SMCO4-205ENST00000529714 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
SMCO4-205ENST00000529714 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
SMCO4-205ENST00000529714 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-205ENST00000529714 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-205ENST00000529714 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
SMCO4-205ENST00000529714 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-205ENST00000529714 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
SMCO4-205ENST00000529714 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
SMCO4-205ENST00000529714 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
SMCO4-205ENST00000529714 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
SMCO4-205ENST00000529714 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SMCO4-205ENST00000529714 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-205ENST00000529714 CTSWP56202 376 aa17.09■□□□□ 0.33
SMCO4-205ENST00000529714 FOXO4P98177 505 aa17.09■□□□□ 0.33
SMCO4-205ENST00000529714 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
SMCO4-205ENST00000529714 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
SMCO4-205ENST00000529714 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
SMCO4-205ENST00000529714 CSF1RP07333 972 aa17.08■□□□□ 0.32
SMCO4-205ENST00000529714 HCLS1P14317 486 aaPredicted RBP17.08■□□□□ 0.32
SMCO4-205ENST00000529714 MTX1Q13505 466 aa17.08■□□□□ 0.32
SMCO4-205ENST00000529714 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
SMCO4-205ENST00000529714 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
SMCO4-205ENST00000529714 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
SMCO4-205ENST00000529714 PDE6BP35913 854 aa17.07■□□□□ 0.32
SMCO4-205ENST00000529714 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
SMCO4-205ENST00000529714 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
SMCO4-205ENST00000529714 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
SMCO4-205ENST00000529714 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
SMCO4-205ENST00000529714 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms