RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
TGFBR3-208ENST00000529608 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
TGFBR3-208ENST00000529608 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
TGFBR3-208ENST00000529608 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
TGFBR3-208ENST00000529608 TEX13AQ9BXU3 409 aaPredicted RBP11.47□□□□□ -0.57
TGFBR3-208ENST00000529608 COL4A5P29400 1685 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 BTBD11A6QL63 1104 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 PRKAR2BP31323 418 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 MASTLQ96GX5 879 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
TGFBR3-208ENST00000529608 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
TGFBR3-208ENST00000529608 LTBP1Q14766 1721 aa11.46□□□□□ -0.58
TGFBR3-208ENST00000529608 SNED1Q8TER0 1413 aa11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 FOXN1O15353 648 aa11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 TAF1DQ9H5J8 278 aaPredicted RBP11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
TGFBR3-208ENST00000529608 NUP98P52948 1817 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 ST5P78524 1137 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 MCM10Q7L590 875 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
TGFBR3-208ENST00000529608 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 PSEN1P49768 467 aa11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 HLFQ16534 295 aa11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 NBPF5PQ86XG9 351 aaPredicted RBP11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
TGFBR3-208ENST00000529608 NPHP1O15259 732 aa11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 VEGFBP49765 207 aa11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 LDHDQ86WU2 507 aa11.42□□□□□ -0.58
TGFBR3-208ENST00000529608 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 RNF123Q5XPI4 1314 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 RIOK3O14730 519 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 C7P10643 843 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 NPR1P16066 1061 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 EAPPQ56P03 285 aaPredicted RBP11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 SOGA3Q5TF21 947 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 CLEC4GQ6UXB4 293 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 MIS18AQ9NYP9 233 aa11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
TGFBR3-208ENST00000529608 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
TGFBR3-208ENST00000529608 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
TGFBR3-208ENST00000529608 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 FZD9O00144 591 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 EPHX2P34913 555 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
TGFBR3-208ENST00000529608 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
TGFBR3-208ENST00000529608 PPP2R1AP30153 589 aa11.38□□□□□ -0.59
TGFBR3-208ENST00000529608 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
TGFBR3-208ENST00000529608 ZNF652Q9Y2D9 606 aa11.38□□□□□ -0.59
TGFBR3-208ENST00000529608 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 LAMB2P55268 1798 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 RASSF10A6NK89 507 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 RGL2O15211 777 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 U2AF1L5P0DN76 240 aaPredicted RBP11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 LBX1P52954 281 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 U2AF1Q01081 240 aaKnown RBP eCLIP11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 LHX8Q68G74 356 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
TGFBR3-208ENST00000529608 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
TGFBR3-208ENST00000529608 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
TGFBR3-208ENST00000529608 IER5LQ5T953 404 aa11.36□□□□□ -0.59
TGFBR3-208ENST00000529608 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
TGFBR3-208ENST00000529608 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
TGFBR3-208ENST00000529608 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-208ENST00000529608 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
TGFBR3-208ENST00000529608 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-208ENST00000529608 SCNN1DP51172 638 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms