RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 ITPK1Q13572 414 aa28.38■■■□□ 2.13
LTBP3-214ENST00000529582 HLFQ16534 295 aa28.38■■■□□ 2.13
LTBP3-214ENST00000529582 RTL5Q5HYW3 569 aaPredicted RBP28.38■■■□□ 2.13
LTBP3-214ENST00000529582 INTS5Q6P9B9 1019 aaKnown RBP28.38■■■□□ 2.13
LTBP3-214ENST00000529582 CLASRPQ8N2M8 674 aaKnown RBP28.38■■■□□ 2.13
LTBP3-214ENST00000529582 GJD4Q96KN9 370 aaPredicted RBP28.38■■■□□ 2.13
LTBP3-214ENST00000529582 CCDC87Q9NVE4 849 aa28.38■■■□□ 2.13
LTBP3-214ENST00000529582 SIL1Q9H173 461 aa28.38■■■□□ 2.13
LTBP3-214ENST00000529582 COL5A3P25940 1745 aaPredicted RBP28.37■■■□□ 2.13
LTBP3-214ENST00000529582 LMBR1LQ6UX01 489 aa28.37■■■□□ 2.13
LTBP3-214ENST00000529582 MYH14Q7Z406 1995 aaKnown RBP28.37■■■□□ 2.13
LTBP3-214ENST00000529582 USP42Q9H9J4 1324 aaKnown RBP28.37■■■□□ 2.13
LTBP3-214ENST00000529582 ATRNO75882 1429 aa28.36■■■□□ 2.13
LTBP3-214ENST00000529582 EIF5BO60841 1220 aaKnown RBP28.36■■■□□ 2.13
LTBP3-214ENST00000529582 PTPN12Q05209 780 aaKnown RBP28.36■■■□□ 2.13
LTBP3-214ENST00000529582 AK9Q5TCS8 1911 aa28.36■■■□□ 2.13
LTBP3-214ENST00000529582 CRKLP46109 303 aaKnown RBP28.36■■■□□ 2.13
LTBP3-214ENST00000529582 RBM25P49756 843 aaKnown RBP28.36■■■□□ 2.13
LTBP3-214ENST00000529582 CASC1Q6TDU7 716 aa28.36■■■□□ 2.13
LTBP3-214ENST00000529582 PI4K2BQ8TCG2 481 aa28.36■■■□□ 2.13
LTBP3-214ENST00000529582 EIF5P55010 431 aaKnown RBP28.35■■■□□ 2.13
LTBP3-214ENST00000529582 HSP90AB3PQ58FF7 597 aa28.35■■■□□ 2.13
LTBP3-214ENST00000529582 NHSQ6T4R5 1651 aa28.34■■■□□ 2.13
LTBP3-214ENST00000529582 ERVV-1B6SEH8 477 aa28.34■■■□□ 2.13
LTBP3-214ENST00000529582 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
LTBP3-214ENST00000529582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.34■■■□□ 2.13
LTBP3-214ENST00000529582 BTAF1O14981 1849 aa28.33■■■□□ 2.13
LTBP3-214ENST00000529582 TTC41PQ6P2S7 1318 aa28.33■■■□□ 2.13
LTBP3-214ENST00000529582 PCCAP05165 728 aaPredicted RBP28.33■■■□□ 2.13
LTBP3-214ENST00000529582 SLC4A3P48751 1232 aa28.33■■■□□ 2.13
LTBP3-214ENST00000529582 TBC1D2BQ9UPU7 963 aa28.33■■■□□ 2.13
LTBP3-214ENST00000529582 TRIM6-TRIM34B2RNG4 842 aa28.32■■■□□ 2.12
LTBP3-214ENST00000529582 IFIT2P09913 472 aaKnown RBP28.32■■■□□ 2.12
LTBP3-214ENST00000529582 AACSQ86V21 672 aa28.32■■■□□ 2.12
LTBP3-214ENST00000529582 DAXXQ9UER7 740 aaPredicted RBP28.32■■■□□ 2.12
LTBP3-214ENST00000529582 TRPC5Q9UL62 973 aaPredicted RBP28.32■■■□□ 2.12
LTBP3-214ENST00000529582 CHMP3Q9Y3E7 222 aa28.32■■■□□ 2.12
LTBP3-214ENST00000529582 GPTP24298 496 aa28.31■■■□□ 2.12
LTBP3-214ENST00000529582 NLRP10Q86W26 655 aa28.31■■■□□ 2.12
LTBP3-214ENST00000529582 RILPL2Q969X0 211 aa28.31■■■□□ 2.12
LTBP3-214ENST00000529582 PTF1AQ7RTS3 328 aa28.3■■■□□ 2.12
LTBP3-214ENST00000529582 ZBTB38Q8NAP3 1195 aaPredicted RBP28.3■■■□□ 2.12
LTBP3-214ENST00000529582 EAF2Q96CJ1 260 aaPredicted RBP28.3■■■□□ 2.12
LTBP3-214ENST00000529582 ONECUT3O60422 494 aaPredicted RBP28.29■■■□□ 2.12
LTBP3-214ENST00000529582 ECHDC1Q9NTX5 307 aa28.29■■■□□ 2.12
LTBP3-214ENST00000529582 FAM89AQ96GI7 184 aa28.28■■■□□ 2.12
LTBP3-214ENST00000529582 GPATCH3Q96I76 525 aa28.28■■■□□ 2.12
LTBP3-214ENST00000529582 SBF2Q86WG5 1849 aa28.28■■■□□ 2.12
LTBP3-214ENST00000529582 PLA2G12BQ9BX93 195 aa28.27■■■□□ 2.12
LTBP3-214ENST00000529582 GLRX3O76003 335 aaKnown RBP28.27■■■□□ 2.12
LTBP3-214ENST00000529582 BECN1Q14457 450 aa28.27■■■□□ 2.12
LTBP3-214ENST00000529582 FAM182BQ5T319 152 aa28.27■■■□□ 2.12
LTBP3-214ENST00000529582 CDHR2Q9BYE9 1310 aa28.27■■■□□ 2.12
LTBP3-214ENST00000529582 ERC2O15083 957 aa28.26■■■□□ 2.11
LTBP3-214ENST00000529582 CCDC8Q9H0W5 538 aaPredicted RBP28.26■■■□□ 2.11
LTBP3-214ENST00000529582 MAP4K4O95819 1239 aaPredicted RBP28.25■■■□□ 2.11
LTBP3-214ENST00000529582 CHMLP26374 656 aa28.25■■■□□ 2.11
LTBP3-214ENST00000529582 ZNF34Q8IZ26 560 aa28.25■■■□□ 2.11
LTBP3-214ENST00000529582 LINC00116Q8NCU8 138 aa28.25■■■□□ 2.11
LTBP3-214ENST00000529582 TFCP2Q12800 502 aa28.25■■■□□ 2.11
LTBP3-214ENST00000529582 USP26Q9BXU7 913 aa28.25■■■□□ 2.11
LTBP3-214ENST00000529582 MYH3P11055 1940 aa28.24■■■□□ 2.11
LTBP3-214ENST00000529582 SEPT12Q8IYM1 358 aa28.23■■■□□ 2.11
LTBP3-214ENST00000529582 TLR7Q9NYK1 1049 aaKnown RBP28.23■■■□□ 2.11
LTBP3-214ENST00000529582 UBN2Q6ZU65 1347 aa28.23■■■□□ 2.11
LTBP3-214ENST00000529582 CAMTA2O94983 1202 aa28.23■■■□□ 2.11
LTBP3-214ENST00000529582 SYNE4Q8N205 404 aa28.23■■■□□ 2.11
LTBP3-214ENST00000529582 ESYT1Q9BSJ8 1104 aa28.23■■■□□ 2.11
LTBP3-214ENST00000529582 BCORQ6W2J9 1755 aa28.22■■■□□ 2.11
LTBP3-214ENST00000529582 REC8O95072 547 aa28.22■■■□□ 2.11
LTBP3-214ENST00000529582 ATG9AQ7Z3C6 839 aa28.22■■■□□ 2.11
LTBP3-214ENST00000529582 CNTROBQ8N137 903 aa28.22■■■□□ 2.11
LTBP3-214ENST00000529582 KIF2CQ99661 725 aa28.22■■■□□ 2.11
LTBP3-214ENST00000529582 QTRT2Q9H974 415 aaKnown RBP28.22■■■□□ 2.11
LTBP3-214ENST00000529582 CSF1RP07333 972 aa28.21■■■□□ 2.11
LTBP3-214ENST00000529582 TNNI3KQ59H18 835 aa28.21■■■□□ 2.11
LTBP3-214ENST00000529582 FPGT-TNNI3KV9GXZ4 949 aa28.21■■■□□ 2.11
LTBP3-214ENST00000529582 ZNF594Q96JF6 807 aaPredicted RBP28.21■■■□□ 2.11
LTBP3-214ENST00000529582 TBC1D2Q9BYX2 928 aa28.21■■■□□ 2.11
LTBP3-214ENST00000529582 TRMT112Q9UI30 125 aaKnown RBP28.21■■■□□ 2.11
LTBP3-214ENST00000529582 KCNQ4P56696 695 aa28.2■■■□□ 2.1
LTBP3-214ENST00000529582 LY75O60449 1722 aa28.2■■■□□ 2.1
LTBP3-214ENST00000529582 CNTNAP4Q9C0A0 1308 aa28.19■■■□□ 2.1
LTBP3-214ENST00000529582 EYA2O00167 538 aa28.19■■■□□ 2.1
LTBP3-214ENST00000529582 IL15P40933 162 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-214ENST00000529582 CCDC57Q2TAC2 916 aa28.19■■■□□ 2.1
LTBP3-214ENST00000529582 CIAO1O76071 339 aa28.18■■■□□ 2.1
LTBP3-214ENST00000529582 IRS4O14654 1257 aaPredicted RBP28.17■■■□□ 2.1
LTBP3-214ENST00000529582 LRRC24Q50LG9 513 aa28.17■■■□□ 2.1
LTBP3-214ENST00000529582 DBNLQ9UJU6 430 aaKnown RBP28.17■■■□□ 2.1
LTBP3-214ENST00000529582 CCDC85AQ96PX6 553 aaPredicted RBP28.16■■■□□ 2.1
LTBP3-214ENST00000529582 TAF1LQ8IZX4 1826 aa28.15■■■□□ 2.1
LTBP3-214ENST00000529582 SUSD4Q5VX71 490 aa28.15■■■□□ 2.1
LTBP3-214ENST00000529582 TTLL11Q8NHH1 800 aa28.15■■■□□ 2.1
LTBP3-214ENST00000529582 CTSWP56202 376 aa28.15■■■□□ 2.1
LTBP3-214ENST00000529582 PUS3Q9BZE2 481 aaKnown RBP28.15■■■□□ 2.1
LTBP3-214ENST00000529582 GPR108Q9NPR9 543 aa28.15■■■□□ 2.1
LTBP3-214ENST00000529582 IFIT5Q13325 482 aaKnown RBP28.14■■■□□ 2.1
LTBP3-214ENST00000529582 RC3H1Q5TC82 1133 aaKnown RBP28.14■■■□□ 2.1
LTBP3-214ENST00000529582 FBXO3Q9UK99 471 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms