RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 HLFQ16534 295 aa28.61■■■□□ 2.17
LTBP3-212ENST00000529189 SMIM5Q71RC9 77 aa28.61■■■□□ 2.17
LTBP3-212ENST00000529189 SRGAP3O43295 1099 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 CDC45O75419 566 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 RPS6KA4O75676 772 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 RGPD3A6NKT7 1758 aaPredicted RBP28.59■■■□□ 2.17
LTBP3-212ENST00000529189 RGPD4Q7Z3J3 1758 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 UTYO14607 1347 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 GCKRQ14397 625 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 GIGYF2Q6Y7W6 1299 aaKnown RBP28.59■■■□□ 2.17
LTBP3-212ENST00000529189 AK7Q96M32 723 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 C22orf23Q9BZE7 217 aa28.59■■■□□ 2.17
LTBP3-212ENST00000529189 NUP98P52948 1817 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 GRM8O00222 908 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 RAB11FIP3O75154 756 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 MTX1Q13505 466 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 TBC1D9Q6ZT07 1266 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 AMIGO3Q86WK7 504 aa28.58■■■□□ 2.17
LTBP3-212ENST00000529189 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 ERVV-1B6SEH8 477 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 TCIRG1Q13488 830 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 OSBPL3Q9H4L5 887 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 BCORQ6W2J9 1755 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 CAMTA2O94983 1202 aa28.57■■■□□ 2.16
LTBP3-212ENST00000529189 RTCBQ9Y3I0 505 aaKnown RBP28.57■■■□□ 2.16
LTBP3-212ENST00000529189 A0A087WZG4 1122 aa28.56■■■□□ 2.16
LTBP3-212ENST00000529189 SURF6O75683 361 aaKnown RBP28.55■■■□□ 2.16
LTBP3-212ENST00000529189 ISCA1Q9BUE6 129 aa28.55■■■□□ 2.16
LTBP3-212ENST00000529189 PDE1AP54750 535 aa28.55■■■□□ 2.16
LTBP3-212ENST00000529189 SALL3Q9BXA9 1300 aa28.54■■■□□ 2.16
LTBP3-212ENST00000529189 CWC25Q9NXE8 425 aaPredicted RBP28.54■■■□□ 2.16
LTBP3-212ENST00000529189 UBR3Q6ZT12 1888 aa28.54■■■□□ 2.16
LTBP3-212ENST00000529189 SCN7AQ01118 1682 aa28.54■■■□□ 2.16
LTBP3-212ENST00000529189 EIF5BO60841 1220 aaKnown RBP28.53■■■□□ 2.16
LTBP3-212ENST00000529189 HSP90AB3PQ58FF7 597 aa28.53■■■□□ 2.16
LTBP3-212ENST00000529189 PHF14O94880 888 aa28.53■■■□□ 2.16
LTBP3-212ENST00000529189 GPTP24298 496 aa28.53■■■□□ 2.16
LTBP3-212ENST00000529189 HSP90AB4PQ58FF6 505 aa28.53■■■□□ 2.16
LTBP3-212ENST00000529189 C4AP0C0L4 1744 aa28.52■■■□□ 2.16
LTBP3-212ENST00000529189 TUBGCP6Q96RT7 1819 aa28.52■■■□□ 2.16
LTBP3-212ENST00000529189 CCDC191Q8NCU4 936 aa28.52■■■□□ 2.16
LTBP3-212ENST00000529189 SLC4A3P48751 1232 aa28.51■■■□□ 2.16
LTBP3-212ENST00000529189 BECN1Q14457 450 aa28.51■■■□□ 2.16
LTBP3-212ENST00000529189 JARID2Q92833 1246 aaPredicted RBP28.51■■■□□ 2.16
LTBP3-212ENST00000529189 SUCLG2Q96I99 432 aa28.51■■■□□ 2.16
LTBP3-212ENST00000529189 SDSP20132 328 aa28.51■■■□□ 2.15
LTBP3-212ENST00000529189 MX1P20591 662 aa28.5■■■□□ 2.15
LTBP3-212ENST00000529189 KIF1BPQ96EK5 621 aa28.5■■■□□ 2.15
LTBP3-212ENST00000529189 EN1Q05925 392 aaPredicted RBP28.5■■■□□ 2.15
LTBP3-212ENST00000529189 TRIM28Q13263 835 aaKnown RBP28.5■■■□□ 2.15
LTBP3-212ENST00000529189 UBE3BQ7Z3V4 1068 aa28.5■■■□□ 2.15
LTBP3-212ENST00000529189 ARHGEF1Q92888 912 aaKnown RBP28.5■■■□□ 2.15
LTBP3-212ENST00000529189 RHPN1Q8TCX5 695 aa28.49■■■□□ 2.15
LTBP3-212ENST00000529189 SRP68Q9UHB9 627 aaKnown RBP28.49■■■□□ 2.15
LTBP3-212ENST00000529189 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
LTBP3-212ENST00000529189 RBM25P49756 843 aaKnown RBP28.48■■■□□ 2.15
LTBP3-212ENST00000529189 SF3B2Q13435 895 aaKnown RBP28.48■■■□□ 2.15
LTBP3-212ENST00000529189 EZH2Q15910 746 aaKnown RBP28.48■■■□□ 2.15
LTBP3-212ENST00000529189 TRAPPC3LQ5T215 181 aa28.48■■■□□ 2.15
LTBP3-212ENST00000529189 NLRP10Q86W26 655 aa28.48■■■□□ 2.15
LTBP3-212ENST00000529189 STAP2Q9UGK3 403 aa28.48■■■□□ 2.15
LTBP3-212ENST00000529189 AOX1Q06278 1338 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 UBN2Q6ZU65 1347 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.47■■■□□ 2.15
LTBP3-212ENST00000529189 HMGB2P26583 209 aaKnown RBP28.47■■■□□ 2.15
LTBP3-212ENST00000529189 ZNF827Q17R98 1081 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 ZNF34Q8IZ26 560 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 KAZALD1Q96I82 304 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 CAMKK2Q96RR4 588 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 BICC1Q9H694 974 aaKnown RBP28.47■■■□□ 2.15
LTBP3-212ENST00000529189 IL1RAPL2Q9NP60 686 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 ZNF652Q9Y2D9 606 aa28.47■■■□□ 2.15
LTBP3-212ENST00000529189 CASP7P55210 303 aa28.46■■■□□ 2.15
LTBP3-212ENST00000529189 RTL5Q5HYW3 569 aaPredicted RBP28.46■■■□□ 2.15
LTBP3-212ENST00000529189 USPL1Q5W0Q7 1092 aa28.46■■■□□ 2.15
LTBP3-212ENST00000529189 H7C1W4 665 aa28.46■■■□□ 2.15
LTBP3-212ENST00000529189 CASC1Q6TDU7 716 aa28.46■■■□□ 2.15
LTBP3-212ENST00000529189 ZPR1O75312 459 aa28.45■■■□□ 2.14
LTBP3-212ENST00000529189 ADRA2BP18089 450 aa28.45■■■□□ 2.14
LTBP3-212ENST00000529189 BCL2L12Q9HB09 334 aa28.45■■■□□ 2.14
LTBP3-212ENST00000529189 RFC4P35249 363 aa28.44■■■□□ 2.14
LTBP3-212ENST00000529189 OS9Q13438 667 aaPredicted RBP28.44■■■□□ 2.14
LTBP3-212ENST00000529189 SSFA2P28290 1259 aa28.44■■■□□ 2.14
LTBP3-212ENST00000529189 CLEC4GQ6UXB4 293 aa28.44■■■□□ 2.14
LTBP3-212ENST00000529189 AKT1S1Q96B36 256 aa28.44■■■□□ 2.14
LTBP3-212ENST00000529189 USP42Q9H9J4 1324 aaKnown RBP28.43■■■□□ 2.14
LTBP3-212ENST00000529189 BAG6P46379 1132 aa28.43■■■□□ 2.14
LTBP3-212ENST00000529189 NIP7Q9Y221 180 aaKnown RBP eCLIP28.43■■■□□ 2.14
LTBP3-212ENST00000529189 DEFB132Q7Z7B7 95 aa28.42■■■□□ 2.14
LTBP3-212ENST00000529189 ERC1Q8IUD2 1116 aa28.42■■■□□ 2.14
LTBP3-212ENST00000529189 EPHA10Q5JZY3 1008 aa28.42■■■□□ 2.14
LTBP3-212ENST00000529189 TSHZ3Q63HK5 1081 aa28.42■■■□□ 2.14
LTBP3-212ENST00000529189 RGL2O15211 777 aa28.41■■■□□ 2.14
LTBP3-212ENST00000529189 FAM89AQ96GI7 184 aa28.41■■■□□ 2.14
LTBP3-212ENST00000529189 TFCP2L1Q9NZI6 479 aa28.41■■■□□ 2.14
LTBP3-212ENST00000529189 PCCAP05165 728 aaPredicted RBP28.41■■■□□ 2.14
LTBP3-212ENST00000529189 ZBTB38Q8NAP3 1195 aaPredicted RBP28.41■■■□□ 2.14
LTBP3-212ENST00000529189 NUTM1Q86Y26 1132 aa28.4■■■□□ 2.14
LTBP3-212ENST00000529189 SUSD4Q5VX71 490 aa28.39■■■□□ 2.14
LTBP3-212ENST00000529189 PA2G4Q9UQ80 394 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms