RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
NUP98-215ENST00000529063 MKRN3Q13064 507 aaKnown RBP8.13□□□□□ -1.11
NUP98-215ENST00000529063 ZNF790Q6PG37 636 aa8.13□□□□□ -1.11
NUP98-215ENST00000529063 PHF12Q96QT6 1004 aa8.13□□□□□ -1.11
NUP98-215ENST00000529063 KCNQ3O43525 872 aa8.12□□□□□ -1.11
NUP98-215ENST00000529063 IL6STP40189 918 aaPredicted RBP8.12□□□□□ -1.11
NUP98-215ENST00000529063 CC2D1BQ5T0F9 858 aaKnown RBP8.12□□□□□ -1.11
NUP98-215ENST00000529063 TNS4Q8IZW8 715 aa8.12□□□□□ -1.11
NUP98-215ENST00000529063 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
NUP98-215ENST00000529063 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
NUP98-215ENST00000529063 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
NUP98-215ENST00000529063 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 A0A087WZG4 1122 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 STARD3NLO95772 234 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 A1BGP04217 495 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
NUP98-215ENST00000529063 PDE6BP35913 854 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 PIP4K2AP48426 406 aaPredicted RBP8.11□□□□□ -1.11
NUP98-215ENST00000529063 PPP1R15BQ5SWA1 713 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
NUP98-215ENST00000529063 ZNF330Q9Y3S2 320 aaPredicted RBP8.11□□□□□ -1.11
NUP98-215ENST00000529063 KDM3BQ7LBC6 1761 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 DLG5Q8TDM6 1919 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 COL4A5P29400 1685 aa8.11□□□□□ -1.11
NUP98-215ENST00000529063 LTBP1Q14766 1721 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 DDNO94850 711 aaPredicted RBP8.1□□□□□ -1.11
NUP98-215ENST00000529063 SRGNP10124 158 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 TEFQ10587 303 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
NUP98-215ENST00000529063 PIP4P2Q8N4L2 257 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 PHACTR3Q96KR7 559 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
NUP98-215ENST00000529063 PASKQ96RG2 1323 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 ZNF541Q9H0D2 1346 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 NUP98P52948 1817 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
NUP98-215ENST00000529063 STYK1Q6J9G0 422 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 OLFM4Q6UX06 510 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 GAS2L2Q8NHY3 880 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 FMNL2Q96PY5 1086 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 TEX13AQ9BXU3 409 aaPredicted RBP8.09□□□□□ -1.11
NUP98-215ENST00000529063 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
NUP98-215ENST00000529063 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 USP16Q9Y5T5 823 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 THSD7BQ9C0I4 1608 aa8.09□□□□□ -1.11
NUP98-215ENST00000529063 CNTNAP1P78357 1384 aa8.09□□□□□ -1.12
NUP98-215ENST00000529063 KLRG2A4D1S0 409 aaPredicted RBP8.08□□□□□ -1.12
NUP98-215ENST00000529063 DPY19L2Q6NUT2 758 aa8.08□□□□□ -1.12
NUP98-215ENST00000529063 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
NUP98-215ENST00000529063 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
NUP98-215ENST00000529063 L3MBTL3Q96JM7 780 aaPredicted RBP8.08□□□□□ -1.12
NUP98-215ENST00000529063 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
NUP98-215ENST00000529063 GPHNQ9NQX3 736 aaPredicted RBP8.08□□□□□ -1.12
NUP98-215ENST00000529063 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 FOXN1O15353 648 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 PRKAR2BP31323 418 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 ST5P78524 1137 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
NUP98-215ENST00000529063 SLC51AQ86UW1 340 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 MASTLQ96GX5 879 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 TAF1DQ9H5J8 278 aaPredicted RBP8.07□□□□□ -1.12
NUP98-215ENST00000529063 ABCC12Q96J65 1359 aa8.07□□□□□ -1.12
NUP98-215ENST00000529063 DPYSL4O14531 572 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 ITGBL1O95965 494 aaPredicted RBP8.06□□□□□ -1.12
NUP98-215ENST00000529063 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
NUP98-215ENST00000529063 CCDC93Q567U6 631 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 SOGA3Q5TF21 947 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 CHRDL2Q6WN34 429 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 MCM10Q7L590 875 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 TRPC6Q9Y210 931 aa8.06□□□□□ -1.12
NUP98-215ENST00000529063 LAMB2P55268 1798 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 SPDYE16A6NNV3 312 aaPredicted RBP8.05□□□□□ -1.12
NUP98-215ENST00000529063 TRIM66O15016 1216 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 NPR1P16066 1061 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
NUP98-215ENST00000529063 PDE4DQ08499 809 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 DCTN1Q14203 1278 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 HLFQ16534 295 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 CLEC4GQ6UXB4 293 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
NUP98-215ENST00000529063 NBPF5PQ86XG9 351 aaPredicted RBP8.05□□□□□ -1.12
NUP98-215ENST00000529063 CCER1Q8TC90 406 aaPredicted RBP8.05□□□□□ -1.12
NUP98-215ENST00000529063 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
NUP98-215ENST00000529063 RNF123Q5XPI4 1314 aa8.04□□□□□ -1.12
NUP98-215ENST00000529063 TRPM7Q96QT4 1865 aa8.04□□□□□ -1.12
NUP98-215ENST00000529063 RIC1Q4ADV7 1423 aa8.04□□□□□ -1.12
NUP98-215ENST00000529063 IQCA1LA6NCM1 817 aa8.04□□□□□ -1.12
NUP98-215ENST00000529063 SNRPA1P09661 255 aaKnown RBP8.04□□□□□ -1.12
NUP98-215ENST00000529063 VEGFBP49765 207 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms