RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
PACS1-207ENST00000528935 RIC1Q4ADV7 1423 aa18.89■□□□□ 0.61
PACS1-207ENST00000528935 UTP14AQ9BVJ6 771 aaKnown RBP18.88■□□□□ 0.61
PACS1-207ENST00000528935 HSPA6P17066 643 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 HOXA10P31260 410 aaPredicted RBP18.87■□□□□ 0.61
PACS1-207ENST00000528935 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
PACS1-207ENST00000528935 RPGRQ92834 1020 aaKnown RBP18.87■□□□□ 0.61
PACS1-207ENST00000528935 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 HYPKQ9NX55 129 aa18.87■□□□□ 0.61
PACS1-207ENST00000528935 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
PACS1-207ENST00000528935 TNRC6CQ9HCJ0 1690 aaKnown RBP18.86■□□□□ 0.61
PACS1-207ENST00000528935 RNF123Q5XPI4 1314 aa18.86■□□□□ 0.61
PACS1-207ENST00000528935 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
PACS1-207ENST00000528935 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
PACS1-207ENST00000528935 RTKN2Q8IZC4 609 aa18.86■□□□□ 0.61
PACS1-207ENST00000528935 RBM46Q8TBY0 533 aaKnown RBP18.86■□□□□ 0.61
PACS1-207ENST00000528935 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
PACS1-207ENST00000528935 CCDC27Q2M243 656 aa18.85■□□□□ 0.61
PACS1-207ENST00000528935 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
PACS1-207ENST00000528935 PLBD2Q8NHP8 589 aa18.85■□□□□ 0.61
PACS1-207ENST00000528935 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
PACS1-207ENST00000528935 TIAM2Q8IVF5 1701 aa18.84■□□□□ 0.61
PACS1-207ENST00000528935 FKBP4Q02790 459 aaKnown RBP eCLIP18.84■□□□□ 0.61
PACS1-207ENST00000528935 OLFM4Q6UX06 510 aa18.84■□□□□ 0.61
PACS1-207ENST00000528935 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
PACS1-207ENST00000528935 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
PACS1-207ENST00000528935 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.6
PACS1-207ENST00000528935 VEGFAP15692 232 aaPredicted RBP18.83■□□□□ 0.6
PACS1-207ENST00000528935 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
PACS1-207ENST00000528935 CC2D2BQ6DHV5 1058 aa18.83■□□□□ 0.6
PACS1-207ENST00000528935 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
PACS1-207ENST00000528935 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.6
PACS1-207ENST00000528935 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
PACS1-207ENST00000528935 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
PACS1-207ENST00000528935 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
PACS1-207ENST00000528935 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
PACS1-207ENST00000528935 FSTL1Q12841 308 aa18.81■□□□□ 0.6
PACS1-207ENST00000528935 ZNF277Q9NRM2 450 aaPredicted RBP18.81■□□□□ 0.6
PACS1-207ENST00000528935 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
PACS1-207ENST00000528935 SH3TC1Q8TE82 1336 aa18.8■□□□□ 0.6
PACS1-207ENST00000528935 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
PACS1-207ENST00000528935 SYNE4Q8N205 404 aa18.8■□□□□ 0.6
PACS1-207ENST00000528935 PSMD1Q99460 953 aa18.8■□□□□ 0.6
PACS1-207ENST00000528935 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
PACS1-207ENST00000528935 POTECB2RU33 542 aa18.79■□□□□ 0.6
PACS1-207ENST00000528935 PPEF1O14829 653 aaPredicted RBP18.79■□□□□ 0.6
PACS1-207ENST00000528935 HCLS1P14317 486 aaPredicted RBP18.79■□□□□ 0.6
PACS1-207ENST00000528935 SNED1Q8TER0 1413 aa18.79■□□□□ 0.6
PACS1-207ENST00000528935 IARSP41252 1262 aaKnown RBP18.78■□□□□ 0.6
PACS1-207ENST00000528935 APLP1P51693 650 aa18.78■□□□□ 0.6
PACS1-207ENST00000528935 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
PACS1-207ENST00000528935 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
PACS1-207ENST00000528935 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
PACS1-207ENST00000528935 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
PACS1-207ENST00000528935 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
PACS1-207ENST00000528935 PHAXQ9H814 394 aaKnown RBP18.78■□□□□ 0.6
PACS1-207ENST00000528935 IL16Q14005 1332 aa18.77■□□□□ 0.6
PACS1-207ENST00000528935 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
PACS1-207ENST00000528935 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
PACS1-207ENST00000528935 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
PACS1-207ENST00000528935 SMC1BQ8NDV3 1235 aa18.77■□□□□ 0.6
PACS1-207ENST00000528935 WDR90Q96KV7 1748 aa18.77■□□□□ 0.59
PACS1-207ENST00000528935 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
PACS1-207ENST00000528935 BBOX1O75936 387 aa18.76■□□□□ 0.59
PACS1-207ENST00000528935 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
PACS1-207ENST00000528935 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
PACS1-207ENST00000528935 ATP6V0A2Q9Y487 856 aa18.76■□□□□ 0.59
PACS1-207ENST00000528935 ABCC4O15439 1325 aa18.75■□□□□ 0.59
PACS1-207ENST00000528935 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
PACS1-207ENST00000528935 FAM89AQ96GI7 184 aa18.75■□□□□ 0.59
PACS1-207ENST00000528935 FZD9O00144 591 aa18.74■□□□□ 0.59
PACS1-207ENST00000528935 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
PACS1-207ENST00000528935 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
PACS1-207ENST00000528935 SLC51AQ86UW1 340 aa18.73■□□□□ 0.59
PACS1-207ENST00000528935 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
PACS1-207ENST00000528935 SP8Q8IXZ3 490 aa18.73■□□□□ 0.59
PACS1-207ENST00000528935 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
PACS1-207ENST00000528935 ZNF541Q9H0D2 1346 aa18.73■□□□□ 0.59
PACS1-207ENST00000528935 IQCA1LA6NCM1 817 aa18.72■□□□□ 0.59
PACS1-207ENST00000528935 GRAPQ13588 217 aa18.72■□□□□ 0.59
PACS1-207ENST00000528935 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
PACS1-207ENST00000528935 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
PACS1-207ENST00000528935 GRAPLQ8TC17 118 aaPredicted RBP18.72■□□□□ 0.59
PACS1-207ENST00000528935 MYD88Q99836 296 aa18.72■□□□□ 0.59
PACS1-207ENST00000528935 STK31Q9BXU1 1019 aa18.72■□□□□ 0.59
PACS1-207ENST00000528935 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
PACS1-207ENST00000528935 CEP350Q5VT06 3117 aa18.72■□□□□ 0.59
PACS1-207ENST00000528935 LAMB2P55268 1798 aa18.71■□□□□ 0.59
PACS1-207ENST00000528935 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
PACS1-207ENST00000528935 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
PACS1-207ENST00000528935 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
PACS1-207ENST00000528935 ZBTB38Q8NAP3 1195 aaPredicted RBP18.71■□□□□ 0.59
PACS1-207ENST00000528935 CCDC191Q8NCU4 936 aa18.71■□□□□ 0.59
PACS1-207ENST00000528935 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
PACS1-207ENST00000528935 VPS33BQ9H267 617 aa18.71■□□□□ 0.59
PACS1-207ENST00000528935 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
PACS1-207ENST00000528935 TMC4Q7Z404 712 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms