RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RPAP2Q8IXW5 612 aaPredicted RBP14.63□□□□□ -0.07
USF1-208ENST00000528768 SRP68Q9UHB9 627 aaKnown RBP14.63□□□□□ -0.07
USF1-208ENST00000528768 MKRN1Q9UHC7 482 aaKnown RBP14.63□□□□□ -0.07
USF1-208ENST00000528768 MYH14Q7Z406 1995 aaKnown RBP14.63□□□□□ -0.07
USF1-208ENST00000528768 TIAM2Q8IVF5 1701 aa14.63□□□□□ -0.07
USF1-208ENST00000528768 POTECB2RU33 542 aa14.62□□□□□ -0.07
USF1-208ENST00000528768 CCT4P50991 539 aaKnown RBP14.62□□□□□ -0.07
USF1-208ENST00000528768 PLEKHO1Q53GL0 409 aaPredicted RBP14.62□□□□□ -0.07
USF1-208ENST00000528768 H0YIN7 160 aa14.61□□□□□ -0.07
USF1-208ENST00000528768 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
USF1-208ENST00000528768 PTCD1O75127 700 aaKnown RBP14.6□□□□□ -0.07
USF1-208ENST00000528768 HMMRO75330 724 aa14.6□□□□□ -0.07
USF1-208ENST00000528768 DLEC1Q9Y238 1755 aa14.6□□□□□ -0.07
USF1-208ENST00000528768 IQCA1LA6NCM1 817 aa14.59□□□□□ -0.07
USF1-208ENST00000528768 NFKBIEO00221 500 aa14.59□□□□□ -0.07
USF1-208ENST00000528768 ERFEQ4G0M1 354 aa14.59□□□□□ -0.07
USF1-208ENST00000528768 ANKRD45Q5TZF3 282 aa14.59□□□□□ -0.07
USF1-208ENST00000528768 C1orf141Q5JVX7 400 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 ZNF530Q6P9A1 599 aaPredicted RBP14.58□□□□□ -0.08
USF1-208ENST00000528768 LDHDQ86WU2 507 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 C2CD5Q86YS7 1000 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 WBP1LQ9NX94 342 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 NARFQ9UHQ1 456 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 LTBP3Q9NS15 1303 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 NRXN2Q9P2S2 1712 aa14.58□□□□□ -0.08
USF1-208ENST00000528768 TMEM88BA6NKF7 163 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 SERPINB2P05120 415 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 AKAP4Q5JQC9 854 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 INTS5Q6P9B9 1019 aaKnown RBP14.57□□□□□ -0.08
USF1-208ENST00000528768 ANKRD44Q8N8A2 993 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 LNPKQ9C0E8 428 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 PASKQ96RG2 1323 aa14.57□□□□□ -0.08
USF1-208ENST00000528768 HOXB7P09629 217 aa14.56□□□□□ -0.08
USF1-208ENST00000528768 MAP2K1Q02750 393 aaPredicted RBP14.56□□□□□ -0.08
USF1-208ENST00000528768 MLLT1Q03111 559 aaPredicted RBP14.56□□□□□ -0.08
USF1-208ENST00000528768 NFIXQ14938 502 aa14.56□□□□□ -0.08
USF1-208ENST00000528768 BMP2KLQ5H9B9 411 aa14.56□□□□□ -0.08
USF1-208ENST00000528768 MIS18AQ9NYP9 233 aa14.56□□□□□ -0.08
USF1-208ENST00000528768 CCDC88AQ3V6T2 1871 aa14.56□□□□□ -0.08
USF1-208ENST00000528768 ADAMTS7Q9UKP4 1686 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
USF1-208ENST00000528768 GNAI3P08754 354 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 PDE6BP35913 854 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 VEGFBP49765 207 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 LBX1P52954 281 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 TEFQ10587 303 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 KRT24Q2M2I5 525 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 SOGA3Q5TF21 947 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 IL17REQ8NFR9 667 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 TBC1D32Q96NH3 1257 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 TJP1Q07157 1748 aa14.55□□□□□ -0.08
USF1-208ENST00000528768 RGS19P49795 217 aa14.54□□□□□ -0.08
USF1-208ENST00000528768 NBR1Q14596 966 aa14.54□□□□□ -0.08
USF1-208ENST00000528768 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
USF1-208ENST00000528768 AFDNP55196 1824 aaKnown RBP14.54□□□□□ -0.08
USF1-208ENST00000528768 COL15A1P39059 1388 aa14.53□□□□□ -0.08
USF1-208ENST00000528768 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
USF1-208ENST00000528768 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
USF1-208ENST00000528768 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 GNAI2P04899 355 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 FLIIQ13045 1269 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 FKBP5Q13451 457 aaPredicted RBP14.52□□□□□ -0.09
USF1-208ENST00000528768 SLC4A10Q6U841 1118 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 BRIP1Q9BX63 1249 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 C22orf23Q9BZE7 217 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 SCN4AP35499 1836 aa14.52□□□□□ -0.09
USF1-208ENST00000528768 A0A087WZG4 1122 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 C21orf2O43822 256 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 DDNO94850 711 aaPredicted RBP14.51□□□□□ -0.09
USF1-208ENST00000528768 SEC24BO95487 1268 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 HSPA8P11142 646 aaKnown RBP14.51□□□□□ -0.09
USF1-208ENST00000528768 CYP19A1P11511 503 aaPredicted RBP14.51□□□□□ -0.09
USF1-208ENST00000528768 DEFB115Q30KQ5 88 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 HDGFL1Q5TGJ6 251 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 ZNF622Q969S3 477 aaKnown RBP eCLIP14.51□□□□□ -0.09
USF1-208ENST00000528768 HDAC5Q9UQL6 1122 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
USF1-208ENST00000528768 FER1L6Q2WGJ9 1857 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 ITGBL1O95965 494 aaPredicted RBP14.5□□□□□ -0.09
USF1-208ENST00000528768 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 MFAP1P55081 439 aaKnown RBP14.5□□□□□ -0.09
USF1-208ENST00000528768 CASC1Q6TDU7 716 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 CNKSR1Q969H4 720 aa14.5□□□□□ -0.09
USF1-208ENST00000528768 TAF1DQ9H5J8 278 aaPredicted RBP14.5□□□□□ -0.09
USF1-208ENST00000528768 BTBD11A6QL63 1104 aa14.49□□□□□ -0.09
USF1-208ENST00000528768 PNMA8AQ86V59 439 aaPredicted RBP14.49□□□□□ -0.09
USF1-208ENST00000528768 BEGAINQ9BUH8 593 aa14.49□□□□□ -0.09
USF1-208ENST00000528768 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
USF1-208ENST00000528768 CDC45O75419 566 aa14.48□□□□□ -0.09
USF1-208ENST00000528768 G2E3Q7L622 706 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms