RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 TRAF1Q13077 416 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
CTNND1-219ENST00000528621 CGNQ9P2M7 1197 aaKnown RBP9.81□□□□□ -0.84
CTNND1-219ENST00000528621 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 CCT2P78371 535 aaKnown RBP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 KIF18AQ8NI77 898 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 RMND1Q9NWS8 449 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 GPTP24298 496 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 RIMS2Q9UQ26 1411 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 FSIP1Q8NA03 581 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 NEK1Q96PY6 1258 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 MPHOSPH6Q99547 160 aaKnown RBP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 POLR3AO14802 1390 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 ANAPC15P60006 121 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 MSH6P52701 1360 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 STX6O43752 255 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 TMTC2Q8N394 836 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 TNPO1Q92973 898 aaKnown RBP9.8□□□□□ -0.84
CTNND1-219ENST00000528621 PKNOX2Q96KN3 472 aa9.8□□□□□ -0.84
CTNND1-219ENST00000528621 HLA-DOAP06340 250 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 CETN1Q12798 172 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 CRNKL1Q9BZJ0 848 aaKnown RBP9.79□□□□□ -0.84
CTNND1-219ENST00000528621 TRPM2O94759 1503 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 ABCC1P33527 1531 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 FOXO3O43524 673 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 IARSP41252 1262 aaKnown RBP9.79□□□□□ -0.84
CTNND1-219ENST00000528621 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 TCP11L1Q9NUJ3 509 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 UBE2HP62256 183 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 AKAP4Q5JQC9 854 aa9.79□□□□□ -0.84
CTNND1-219ENST00000528621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.79□□□□□ -0.847e-6■□□□□ 8.3
CTNND1-219ENST00000528621 CRACR2AQ9BSW2 395 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 WDR62O43379 1518 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 GCOM1H8Y6P7 765 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 MYZAPP0CAP1 466 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 GTPBP4Q9BZE4 634 aaKnown RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 ATP10BO94823 1461 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 RRP9O43818 475 aaKnown RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 EHBP1Q8NDI1 1231 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 CABP5Q9NP86 173 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 PIK3C2GO75747 1445 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 ASXL2Q76L83 1435 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 RFC4P35249 363 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
CTNND1-219ENST00000528621 NAA15Q9BXJ9 866 aaKnown RBP9.78□□□□□ -0.84
CTNND1-219ENST00000528621 SHTN1A0MZ66 631 aa9.77□□□□□ -0.84
CTNND1-219ENST00000528621 TSPY2A6NKD2 308 aa9.77□□□□□ -0.84
CTNND1-219ENST00000528621 NGLY1Q96IV0 654 aa9.77□□□□□ -0.84
CTNND1-219ENST00000528621 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.84
CTNND1-219ENST00000528621 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 IFI16Q16666 785 aaKnown RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 INCENPQ9NQS7 918 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 MAPKBP1O60336 1514 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC172P0C7W6 258 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 CTAGE1Q96RT6 745 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 PARD3Q8TEW0 1356 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 DDX12PQ92771 950 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 NUP153P49790 1475 aaKnown RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 TTC41PQ6P2S7 1318 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 PAFAH1B1P43034 410 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-219ENST00000528621 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CTNND1-219ENST00000528621 LUZP1Q86V48 1076 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 PI4KAP2A4QPH2 592 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 GNAT2P19087 354 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 PI4KAP1Q8N8J0 262 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.76□□□□□ -0.854e-9■□□□□ 9.9
CTNND1-219ENST00000528621 ATP8B2P98198 1209 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms